Pairwise Alignments

Query, 433 a.a., NCS2 family permease from Methanococcus maripaludis S2

Subject, 444 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  385 bits (990), Expect = e-111
 Identities = 196/429 (45%), Positives = 284/429 (66%), Gaps = 2/429 (0%)

Query: 5   LARYFGFEEHKTNFKVETMAGVTTFMTMAYIIFVNPSILSLAGMDFGAVMVATCISAALG 64
           L+R F   +H T  + E +AG+TTF+TM YI+FVNP IL  A MD   V V TC+ A +G
Sbjct: 16  LSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIG 75

Query: 65  TFIMGVYAKYPFALAPGMGLNAFFTFGVVMGMGLSWQTALGAVFISGILFILLTLTKIRT 124
           +  MG++A  P ALAP MGLNAFF F VV  MG+SWQT +GA+F   +   LLTL +IR 
Sbjct: 76  SIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRY 135

Query: 125 WIFDAIPDALKYGTAVGIGLFIAFIGLKSAGVIVANEATLVGLGNVLSPATFLALFGLFA 184
           W+   IP +L+ G   GIGLFIA +GLK+ GVIVAN+ TLV +G++ S    L + G F 
Sbjct: 136 WMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFI 195

Query: 185 TAAMMARKVTGAILWGIILTAVIGMGLGVSALPAGLVAMPPSLAPTLMQMDVMGALSFGL 244
              + +R    A+L  I++T+  G+  G     +G+ ++PP ++  + ++D+ GAL+  L
Sbjct: 196 ITVLSSRHFHAAVLVSIVVTSCCGLFFG-DVHFSGVYSIPPDISGVIGEVDLSGALTLEL 254

Query: 245 INIILAFFFVDLFDTLGTLSALSSQAGYMK-DGKLPKAEKALMSDSVATAVGAALGTSTV 303
             II +F  ++LFD+ GTL  ++ +AG +  +GK P   KAL  DSV++  GA +GTS+V
Sbjct: 255 AGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSV 314

Query: 304 TSYVESASGIGLGGRTGFVSVVVAALFLLSIFFSPFVAAIPAYATAPALIIVGALMISAI 363
           T+Y+ES SG+ +GGRTG  +VVV  +FLL +FFSP VA +P YATA ALI VG LM S++
Sbjct: 315 TAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSL 374

Query: 364 KRIDLDDITESVPAFIALITIPLTYSIATGLQLGFIFYPLIKIIAGRSKEVHPIVYLLAI 423
            R++ DD TESVPAFI  + +P T+SI  G+ LGF+ Y ++K+  GR ++++  V ++A 
Sbjct: 375 ARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAA 434

Query: 424 IFAARFVYI 432
           +FA + + +
Sbjct: 435 LFALKIILV 443