Pairwise Alignments

Query, 272 a.a., 2-amino-3 7-dideoxy-D-threo-hept-6-ulosonate synthase from Methanococcus maripaludis S2

Subject, 350 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 16/186 (8%)

Query: 29  IIPMDHGV--------SSGPLDGIKDMRITTNAVADGGANAVLGHKGLVRHGHRGYGRDI 80
           I+P+D GV        ++ PL    D +       + G N V    G++    R Y   I
Sbjct: 70  ILPVDQGVEHSAGASFAANPL--YFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRI 127

Query: 81  GLIIHMSAGTSIS-PDPNKKVIVTTVEDAMRMGADAVSLHVNVGAESDFEMYRDLGLISE 139
             ++ ++   ++S P+   + +  +VE A  MGA AV   +  G+E       ++    E
Sbjct: 128 PFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFE 187

Query: 140 TCEHWGMPLIAMMYPRGPKIKDE-----KDPEVVAHAARLGAELGADIIKTNYTGDPDTF 194
                GM  +   Y R    K +        ++   A  L A +GADI+K     +   +
Sbjct: 188 RAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGY 247

Query: 195 KEVVKG 200
           K +  G
Sbjct: 248 KAINYG 253