Pairwise Alignments

Query, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

Subject, 458 a.a., GTPase component of the signal recognition particle (SRP) from Pseudomonas putida KT2440

 Score =  181 bits (458), Expect = 5e-50
 Identities = 104/293 (35%), Positives = 165/293 (56%), Gaps = 8/293 (2%)

Query: 78  VTKSIKKVLGKDVILTEDDIEDVLEEMEMELFEADVAFDVVEKIIESLKNQLVGLKISAK 137
           ++++++ V GK   LTED+I+D L E+ M L EADVA  VV+  + S+K++ VG ++S  
Sbjct: 9   LSQTLRHVTGK-AKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKDRAVGTEVSRS 67

Query: 138 DDPEEITINALKKSIKGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLA 197
             P +  +  ++  ++ ++     D+            PAV+L  G+ G GKTT+  KLA
Sbjct: 68  LTPGQAFVKIVQAELESLMGAANEDL------ALNAAPPAVVLMAGLQGAGKTTTAGKLA 121

Query: 198 YILKEKGYSAVMA-AGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYDAISHAKA 256
             LKE+   +VM  + D +R  AI+QLE    + G+            A+   AI  AK 
Sbjct: 122 RFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQKPVAIAEAAIREAKL 181

Query: 257 KGLNVVLADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFNNTIN 316
           K ++VV+ DTAGR   + ++MDEIK +    KP   +FV D++ G DA + A+ F   + 
Sbjct: 182 KFIDVVIVDTAGRLHIDADMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFGEALP 241

Query: 317 INGAILTKTDADAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKL 369
           + G +LTK D DA+GGAALS+    GKPI F+G+G++   L+ F  D +  ++
Sbjct: 242 LTGVVLTKVDGDARGGAALSVRAITGKPIKFIGMGEKTEALEPFHPDRVASRI 294