Pairwise Alignments

Query, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

Subject, 498 a.a., Signal Recognition Particle (SRP) receptor from Escherichia coli BL21

 Score =  202 bits (513), Expect = 2e-56
 Identities = 131/333 (39%), Positives = 190/333 (57%), Gaps = 25/333 (7%)

Query: 53  EKDLKEINTESFEKKEKIGFLDKLAVTK-SIKKVLGKDVILT---EDDIEDVLEEMEMEL 108
           E+ ++EI  E  EK  K GF  +L  +    K+ LG   I     +   +D+ EE+E +L
Sbjct: 178 EQPVEEIAQEQ-EKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQL 236

Query: 109 FEADVAFDVVEKIIESLKNQLVGLKISAKDDPEEITINALKKSIKGILSQEKIDVFNLID 168
             ADV  +   KII +L     G       D E         ++ G+L +E  ++   +D
Sbjct: 237 LIADVGVETTRKIITNLTE---GASRKQLRDAE---------ALYGLLKEEMGEILAKVD 284

Query: 169 EK-KANGE-PAVLLFVGINGTGKTTSISKLAYILKEKGYSAVMAAGDTFRAGAIEQLEEH 226
           E     G+ P V+L VG+NG GKTT+I KLA   +++G S ++AAGDTFRA A+EQL+  
Sbjct: 285 EPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVW 344

Query: 227 GKNTGIKVIKHQKGADSAAVIYDAISHAKAKGLNVVLADTAGRQTTNINLMDEIKKVVRV 286
           G+   I VI    GADSA+VI+DAI  AKA+ ++V++ADTAGR     +LM+E+KK+VRV
Sbjct: 345 GQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRV 404

Query: 287 TK------PDLIIFVGDSLAGNDAISQAEEFNNTININGAILTKTDADAKGGAALSIAYS 340
            K      P  ++   D+  G +A+SQA+ F+  + + G  LTK D  AKGG   S+A  
Sbjct: 405 MKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQ 464

Query: 341 IGKPILFMGVGQRYSDLQEFDVDWMIKKLFSEE 373
            G PI ++GVG+R  DL+ F  D  I+ LF+ E
Sbjct: 465 FGIPIRYIGVGERIEDLRPFKADDFIEALFARE 497