Pairwise Alignments

Query, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

Subject, 495 a.a., Malate-2H(+)/Na(+)-lactate antiporter from Alteromonas macleodii MIT1002

 Score = 68.2 bits (165), Expect = 7e-16
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)

Query: 352 LPAITILILAWSLGSVIGD-LGTGTYLSSLIQN--SLPVQILPAILFLLSGFMAFSTGTS 408
           LP++++LI+   +G +IG  + +GT  + +     +L  QI  A   ++   ++ S GTS
Sbjct: 74  LPSVSVLIV---VGMIIGIWIASGTVPTIIYYGLKTLSPQIFLAAGMVICAVVSVSLGTS 130

Query: 409 WGTFGIMLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISDTTIMSSTGAGTKHI 468
           WG+ G +    + +  G  +P++      AV+ GA +GD  SP+SDTT ++    GT   
Sbjct: 131 WGSVGTVGLALMGIGEGFDIPKYWT--AGAVVSGAFFGDKVSPLSDTTNLAPAVTGTDVF 188

Query: 469 DHVQTQLPYTTLIGIMAFLGYLIVGYTI 496
            H++  +  T    ++AFL YL VG+ +
Sbjct: 189 SHIKNMMATTIPAMVLAFLIYLGVGFFV 216



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 12/189 (6%)

Query: 7   SLLPPVVAIGLALITKRVYMSLFLGILAG---SLLYNNWNIVASASHIVNTIIGSVELTS 63
           +LLP +V +GLAL       +LF G + G   ++     ++ A   +  N   G    T+
Sbjct: 244 ALLPALVVMGLALKKIPPLPALFAGAVVGGAFAMFMQGQSLQAVFDYANN---GYAIQTN 300

Query: 64  ITGISSFTGVGNLWNLL--ILLFLVMLGILIALITRAGGALAYGNWASTKIKSKEG---A 118
           I  I S    G + +++  I L L+ LG   AL T  G   +  N   +K K+  G   A
Sbjct: 301 IVEIDSLLNRGGVQSMMWTISLVLIALGFGGALET-TGCLRSIINAIKSKAKTFAGTQIA 359

Query: 119 SLSTSLLGILLFIDDYFNCLTVGTVMKPITDKFKISRAKLAYIIDSTAAPVCILMPVSSW 178
           ++ T+    L+  D Y +    G +  P+      S   L+  I+     +  L+P ++ 
Sbjct: 360 AVGTAFSTNLVAGDPYLSVALPGRMYSPVYRGMGYSTLNLSRGIEEGGTLMSPLIPWNAG 419

Query: 179 FAAVVGNLG 187
            A V+  LG
Sbjct: 420 GAFVISALG 428