Pairwise Alignments

Query, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

Subject, 491 a.a., Malate-2H(+)/Na(+)-lactate antiporter from Alteromonas macleodii MIT1002

 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 14/152 (9%)

Query: 347 GSKLMLPAITILILAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFLLSGFMAFSTG 406
           G+ L+L A+  LI  W L    G + T  Y    + N        A   L+   +A S G
Sbjct: 79  GACLILLAVGSLIGTWMLA---GTVPTLIYFGLELLNP---SFFYAAACLICAVVAMSIG 132

Query: 407 TSW---GTFGIMLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISDTTIMSSTGA 463
           +SW    T G+ L     M V  GM         AV+ GA +GD  SP+S+TT ++   A
Sbjct: 133 SSWTTAATVGVAL-----MGVSAGMEMSAAITAGAVVSGAYFGDKISPLSETTNLAPAVA 187

Query: 464 GTKHIDHVQTQLPYTTLIGIMAFLGYLIVGYT 495
           GT   +H++  L  T    ++A + + ++G++
Sbjct: 188 GTDLFEHIRYMLWTTIPSFVIALILFTVLGFS 219



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 35/200 (17%)

Query: 2   DFGILSLLPPVVAIGLALITKRVYMSLFLGILAGSL--LYNNWNIVAS-ASHIVNTIIGS 58
           D G   L+P VV + LA+     + ++F+G L G +  +   W++V S AS   +  +G+
Sbjct: 241 DLGWHLLIPLVVLLTLAIKKMPAFPAVFIGALLGGVWAVVFQWDVVTSMASGDDSVNVGA 300

Query: 59  VEL------------TSITGISSFTGVGNLWNLLILLFLVMLGILI-ALITRAG------ 99
           +++            T    ++S    G + ++L  ++L++  +   A++ R G      
Sbjct: 301 LKVVWTALFDGVSFSTPDENLNSLLSRGGMSSMLNTIWLIICAMSFGAVLERVGLLKRAV 360

Query: 100 -----GALAYGNWASTKIKSKEGASLSTSLLGILLFIDDYFNCLTVGTVMKPITDKFKIS 154
                GA + G+  S  I +  G +L T+        D Y + +  G + K    K  + 
Sbjct: 361 SAILIGAKSAGDMVSRTILTCFGTNLVTA--------DQYISIVMPGRMYKEEFKKRGLD 412

Query: 155 RAKLAYIIDSTAAPVCILMP 174
           +  L+  ++        L+P
Sbjct: 413 QLNLSRSLEDGGTLTSPLIP 432



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 379 SLIQNSLPVQILPAILFLLSGFMAFSTGTSWGTFGIMLPIAVPMAVGLGM 428
           SL+   LP  IL  ++ + S    F+  +S+G   I L +A+ +A  +GM
Sbjct: 10  SLLDAMLP--ILALVIMMGSAVYLFADSSSYGPNQIALLLAMGLAAIIGM 57