Pairwise Alignments

Query, 465 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 296 a.a., ATPase AAA from Pseudomonas simiae WCS417

 Score =  187 bits (476), Expect = 3e-52
 Identities = 110/276 (39%), Positives = 168/276 (60%), Gaps = 36/276 (13%)

Query: 199 VAFRWNNKTGFSGIKYCDLVDME----NIVGYNYQKEILLKNTSAFIEGNPANNILLVGS 254
           +A RW  + G SG      V +E    +++G + Q+E L +NT  FI+G PAN+ LL GS
Sbjct: 36  LAARWQRE-GRSGFLLPLDVSLEMRLSDLIGVDKQRETLARNTQQFIDGLPANHALLWGS 94

Query: 255 RGTGKSSLVKSLVKEYCLDGLRIIELKKSQLKDFGEMVDHLRNRNKKFIVFLDDLSFEDN 314
           RGTGKSS+V++L+ ++   GLR+IE+++  L D   +V+ L    ++FI+F DDLSFE  
Sbjct: 95  RGTGKSSMVRALLAQHAKAGLRLIEIERDHLADLPRVVEQLVKLPQRFILFCDDLSFEAG 154

Query: 315 ETEYKELKSVLEGTLEKKPENVIIYATSNRRNLIKE------SWSERDSDIHSNDSINEK 368
           E +Y+ LKSVL+G+LE+ PENV++YATSNRR+L+ E      +W   D ++H ++++ +K
Sbjct: 155 EGDYRVLKSVLDGSLEQAPENVLLYATSNRRHLVPENQSDNDNWKRVDGELHPSEAVEDK 214

Query: 369 MSLSDRFGITLSFYSPTQEEYLNMVKKLAIENGINPCKADDVKFYSMNIGKLSDQTGMIM 428
           ++LSDRFG+ LSFY  TQE +L++V+                      IG+L+ + G  +
Sbjct: 215 IALSDRFGLWLSFYPFTQEHFLDVVEHW--------------------IGELASKAG--L 252

Query: 429 AW---ETLREDAVKWGMSQNGFSGRTAKQFIDYIIG 461
            W   E L   AV+W   +   +GR A QF  Y +G
Sbjct: 253 QWQRDEALDILAVRWATGRGNRNGRCAYQFARYWVG 288