Pairwise Alignments
Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 615 a.a., tetratricopeptide repeat protein from Paraburkholderia sabiae LMG 24235
Score = 86.7 bits (213), Expect = 2e-21
Identities = 73/319 (22%), Positives = 143/319 (44%)
Query: 74 LDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKG 133
LD AE + ++L+P + AL LG + Q ++++A + ++ G
Sbjct: 17 LDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAGLQLNLG 76
Query: 134 ICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNL 193
LK LG D+++E F + T + +LG Y G ++ A+ F+K+L L
Sbjct: 77 NALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFEKSLRLQPMD 136
Query: 194 KYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEK 253
S G ++ AV+ F +A+ + A N G++ + A + F
Sbjct: 137 ASSHVNLGNALHALGRHREAVDSFRRALELRPGHAGAHNNIGMALNALGSATEASAHFRA 196
Query: 254 ALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYN 313
AL + F A++L+ G++E+AV ++ + + + P GLG + L +
Sbjct: 197 ALKIEPRFTAARFNLANTLDATGQHEQAVAEFEAVLAMQANLPPALFGLGNALASLGRHE 256
Query: 314 SSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNS 373
+ +E+AV L+P ++W +LG + + ++ F+++L L + A G +
Sbjct: 257 EARPRFERAVGLDPNFALAWLSLGAAHHALGAHAAAVRAFDQALRLRPDLPMAHMNRGVT 316
Query: 374 YLLLKNYEKALMCYDKAIE 392
L L ++++ L Y+ +E
Sbjct: 317 LLTLGDFKRGLPEYEWRLE 335
Score = 79.7 bits (195), Expect = 2e-19
Identities = 64/308 (20%), Positives = 138/308 (44%)
Query: 51 LELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDK 110
L+LDP + +L LG + + A R +L P++ +LG + D+
Sbjct: 28 LDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAGLQLNLGNALKALGRLDQ 87
Query: 111 ALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCY 170
A+ + L + + + G + G ++++V+AF+KS + +LG
Sbjct: 88 AIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFEKSLRLQPMDASSHVNLGNAL 147
Query: 171 YQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDA 230
+ G + +A+ F +AL L + N G+ T A F A+ + + A
Sbjct: 148 HALGRHREAVDSFRRALELRPGHAGAHNNIGMALNALGSATEASAHFRAALKIEPRFTAA 207
Query: 231 IYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIE 290
+N + + ++ A++ FE L + + P F ++L LG +E+A +++A+
Sbjct: 208 RFNLANTLDATGQHEQAVAEFEAVLAMQANLPPALFGLGNALASLGRHEEARPRFERAVG 267
Query: 291 LDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESI 350
LD + W LG +++ L + ++++++++A+ L P+ ++ N G ++ +
Sbjct: 268 LDPNFALAWLSLGAAHHALGAHAAAVRAFDQALRLRPDLPMAHMNRGVTLLTLGDFKRGL 327
Query: 351 SYFEKSLD 358
+E L+
Sbjct: 328 PEYEWRLE 335
Score = 73.9 bits (180), Expect = 1e-17
Identities = 55/233 (23%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Query: 166 LGYCYYQNGEYDKAIGCFDKALTL---DGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVI 222
LG +Q G++++A +A L D L+ +L + +Q A+E F A+
Sbjct: 41 LGVLRHQQGQHEEAADLVRRAADLRPQDAGLQLNLGNALKALGRLDQ---AIERFRNALT 97
Query: 223 QDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAV 282
+ A YN G + + ++ A+ FEK+L L + + ++L+ LG + +AV
Sbjct: 98 LAPTFPMAHYNLGNAYALAGRHEDAVDAFEKSLRLQPMDASSHVNLGNALHALGRHREAV 157
Query: 283 LNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYK 342
++++A+EL + + +G++ N L + + A+++ P + NL
Sbjct: 158 DSFRRALELRPGHAGAHNNIGMALNALGSATEASAHFRAALKIEPRFTAARFNLANTLDA 217
Query: 343 NKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDP 395
+ ++++ FE L + +N A GLGN+ L +E+A +++A+ +DP
Sbjct: 218 TGQHEQAVAEFEAVLAMQANLPPALFGLGNALASLGRHEEARPRFERAVGLDP 270
Score = 66.2 bits (160), Expect = 2e-15
Identities = 39/180 (21%), Positives = 85/180 (47%)
Query: 224 DECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVL 283
D + DA++ G+ ++ ++ A +A DL + ++L LG ++A+
Sbjct: 31 DPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAGLQLNLGNALKALGRLDQAIE 90
Query: 284 NYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKN 343
++ A+ L P+ LG +Y + ++ ++EK++ L P D S NLG +
Sbjct: 91 RFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFEKSLRLQPMDASSHVNLGNALHAL 150
Query: 344 KNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLYNEPKIS 403
+ E++ F ++L+L + A N +G + L + +A + A++I+P + + +
Sbjct: 151 GRHREAVDSFRRALELRPGHAGAHNNIGMALNALGSATEASAHFRAALKIEPRFTAARFN 210
Score = 48.9 bits (115), Expect = 4e-10
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 266 FYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVEL 325
F +A S +R G + A Y+ ++LD + LG+ + ++ + +A +L
Sbjct: 5 FDRAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADL 64
Query: 326 NPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALM 385
P+D NLG +++I F +L L A LGN+Y L +E A+
Sbjct: 65 RPQDAGLQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVD 124
Query: 386 CYDKAIEIDPL 396
++K++ + P+
Sbjct: 125 AFEKSLRLQPM 135
Score = 47.4 bits (111), Expect = 1e-09
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 30 MGEQCYLEKDYETSVKCFDKALELDPDNTCS-------LEYLGKY---------SMENR- 72
+G L +E +V F+K+L L P + S L LG++ ++E R
Sbjct: 109 LGNAYALAGRHEDAVDAFEKSLRLQPMDASSHVNLGNALHALGRHREAVDSFRRALELRP 168
Query: 73 -------NLDM----------AEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYY 115
N+ M A +F +++EP A +L + ++++A+ +
Sbjct: 169 GHAGAHNNIGMALNALGSATEASAHFRAALKIEPRFTAARFNLANTLDATGQHEQAVAEF 228
Query: 116 NKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGE 175
+L + ++ F G L LG ++E+ F+++ G L W LG ++ G
Sbjct: 229 EAVLAMQANLPPALFGLGNALASLGRHEEARPRFERAVGLDPNFALAWLSLGAAHHALGA 288
Query: 176 YDKAIGCFDKALTLDGNLKYSLNGKGL 202
+ A+ FD+AL L +L + +G+
Sbjct: 289 HAAAVRAFDQALRLRPDLPMAHMNRGV 315
Score = 29.3 bits (64), Expect = 3e-04
Identities = 23/111 (20%), Positives = 47/111 (42%)
Query: 40 YETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLG 99
+E +V F+ L + + +L LG + A F R + L+P A SLG
Sbjct: 221 HEQAVAEFEAVLAMQANLPPALFGLGNALASLGRHEEARPRFERAVGLDPNFALAWLSLG 280
Query: 100 EIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFD 150
H + + A+ +++ L + + +G+ L LG++ + ++
Sbjct: 281 AAHHALGAHAAAVRAFDQALRLRPDLPMAHMNRGVTLLTLGDFKRGLPEYE 331