Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 405 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 44.3 bits (103), Expect = 7e-09
 Identities = 32/162 (19%), Positives = 72/162 (44%)

Query: 230 AIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAI 289
           A + +G + +++ +   A+  ++ AL L    P        +  RLG + +AV    +A 
Sbjct: 13  AFFFEGNTLFEADRLDEALGRYQAALALVPGRPSILANLGVTQCRLGRWPEAVATLAQAT 72

Query: 290 ELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNES 349
           + D  +   W  LGLS+  L+ + ++  + ++ V L         +L     + +   E+
Sbjct: 73  KADPTHRDAWIALGLSHEALSNWAAAADALQQGVRLGASTPQLHLSLAMCLLRLERPGEA 132

Query: 350 ISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAI 391
           +   +++L L+     AW+  G+         +A  C+++A+
Sbjct: 133 LRSLDQALALDPTLAEAWSQRGSLMREAGQLAEAARCFEQAL 174



 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 28/145 (19%), Positives = 64/145 (44%)

Query: 265 YFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVE 324
           +F++ ++L      ++A+  Y+ A+ L    P   + LG++   L  +  ++ +  +A +
Sbjct: 14  FFFEGNTLFEADRLDEALGRYQAALALVPGRPSILANLGVTQCRLGRWPEAVATLAQATK 73

Query: 325 LNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKAL 384
            +P    +W  LG       N+  +    ++ + L ++       L    L L+   +AL
Sbjct: 74  ADPTHRDAWIALGLSHEALSNWAAAADALQQGVRLGASTPQLHLSLAMCLLRLERPGEAL 133

Query: 385 MCYDKAIEIDPLYNEPKISKSSISK 409
              D+A+ +DP   E    + S+ +
Sbjct: 134 RSLDQALALDPTLAEAWSQRGSLMR 158



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 34/157 (21%), Positives = 63/157 (40%)

Query: 167 GYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDEC 226
           G   ++    D+A+G +  AL L       L   G+   +  ++  AV    +A   D  
Sbjct: 18  GNTLFEADRLDEALGRYQAALALVPGRPSILANLGVTQCRLGRWPEAVATLAQATKADPT 77

Query: 227 YYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYK 286
           + DA    G+S      ++ A    ++ + L  S P  +   A  L RL    +A+ +  
Sbjct: 78  HRDAWIALGLSHEALSNWAAAADALQQGVRLGASTPQLHLSLAMCLLRLERPGEALRSLD 137

Query: 287 KAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAV 323
           +A+ LD      WS  G       +   + + +E+A+
Sbjct: 138 QALALDPTLAEAWSQRGSLMREAGQLAEAARCFEQAL 174



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 34/172 (19%), Positives = 66/172 (38%)

Query: 21  TESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIY 80
           TE +  +   G   +     + ++  +  AL L P     L  LG           A   
Sbjct: 8   TEQAKAFFFEGNTLFEADRLDEALGRYQAALALVPGRPSILANLGVTQCRLGRWPEAVAT 67

Query: 81  FGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLG 140
             +  + +P ++ A  +LG  H +   +  A     + + +  S  +      +CL  L 
Sbjct: 68  LAQATKADPTHRDAWIALGLSHEALSNWAAAADALQQGVRLGASTPQLHLSLAMCLLRLE 127

Query: 141 NYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGN 192
              E++ + D++     TL   W+  G    + G+  +A  CF++AL   G+
Sbjct: 128 RPGEALRSLDQALALDPTLAEAWSQRGSLMREAGQLAEAARCFEQALAHGGD 179



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 35/171 (20%), Positives = 61/171 (35%)

Query: 99  GEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYET 158
           G      +  D+AL  Y   L +           G+    LG + E+V    ++T    T
Sbjct: 18  GNTLFEADRLDEALGRYQAALALVPGRPSILANLGVTQCRLGRWPEAVATLAQATKADPT 77

Query: 159 LFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFD 218
               W  LG  +     +  A     + + L  +         +C  + E+   A+   D
Sbjct: 78  HRDAWIALGLSHEALSNWAAAADALQQGVRLGASTPQLHLSLAMCLLRLERPGEALRSLD 137

Query: 219 KAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKA 269
           +A+  D    +A   +G    ++ + + A  CFE+AL          FY A
Sbjct: 138 QALALDPTLAEAWSQRGSLMREAGQLAEAARCFEQALAHGGDETLHRFYLA 188