Pairwise Alignments
Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Score = 74.3 bits (181), Expect = 2e-18
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 247 AISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSY 306
AI +EKA+ LN + + + G+ EKA KA+E++ KNP + LGL Y
Sbjct: 46 AIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYY 105
Query: 307 NYLN-EYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKY 365
LN + N +I +EKA+ ++PE++ WS LGY Y +Y S FEK+ ++N ++Y
Sbjct: 106 --LNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQY 163
Query: 366 A 366
+
Sbjct: 164 S 164
Score = 67.0 bits (162), Expect = 4e-16
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 249 SCFEKALDLNNSNPYCYFYKADSLNRLG------EYEKAVLNYKKAIELDSKNPIFWSGL 302
+CF + NN K+ + +G + +KA+ Y+KAI+L+ + S L
Sbjct: 14 TCFAGCFEQNNLE------KSQEMAEIGFAYIGIDNDKAIEYYEKAIKLNPDDANAISFL 67
Query: 303 GLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSN 362
G Y+ + + + KA+E+ P++ + NLG L Y N + N +I FEK+L ++
Sbjct: 68 GTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLG-LYYLNHDDNMAIGCFEKALRIDPE 126
Query: 363 NKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDP 395
N+ W+ LG +Y + +Y + + ++KA EI+P
Sbjct: 127 NECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
Score = 55.1 bits (131), Expect = 2e-12
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 22 ESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYF 81
E S AE+G Y+ D + +++ ++KA++L+PD+ ++ +LG + + A Y
Sbjct: 26 EKSQEMAEIGF-AYIGIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYL 84
Query: 82 GRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGN 141
+ +E+EP+N +LG +L+ ++ + A+ + K L ID W G +G+
Sbjct: 85 TKALEMEPKNPWMYYNLGLYYLNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIGD 143
Query: 142 YDESVEAFDKS 152
Y S F+K+
Sbjct: 144 YTNSKLNFEKA 154
Score = 55.1 bits (131), Expect = 2e-12
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 75 DMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGI 134
D A Y+ + I+L P++ A+ LG ++ + + +KA Y K LE++ W Y +
Sbjct: 44 DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPK--NPWMYYNL 101
Query: 135 CLKMLGNYDE-SVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNL 193
L L + D ++ F+K+ W+ LGY YY G+Y + F+KA ++
Sbjct: 102 GLYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKD 161
Query: 194 KYS 196
+YS
Sbjct: 162 QYS 164
Score = 52.0 bits (123), Expect = 1e-11
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 165 DLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQD 224
++G+ Y + DKAI ++KA+ L+ + +++ G + + A E KA+ +
Sbjct: 33 EIGFAYI-GIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEME 91
Query: 225 ECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLN 284
YN G+ Y + + AI CFEKAL ++ N C+ + +G+Y + LN
Sbjct: 92 PKNPWMYYNLGLY-YLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLN 150
Query: 285 YKKAIELDSKN 295
++KA E++ K+
Sbjct: 151 FEKAYEINPKD 161
Score = 43.5 bits (101), Expect = 5e-09
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 37 EKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALK 96
E D E + + KALE++P N LG Y + N + +MA F + + ++PEN+C
Sbjct: 74 EGDREKAYEYLTKALEMEPKNPWMYYNLGLYYL-NHDDNMAIGCFEKALRIDPENECCWS 132
Query: 97 SLGEIHLSQEEYDKALYYYNKLLEID 122
LG + +Y + + K EI+
Sbjct: 133 QLGYTYYDIGDYTNSKLNFEKAYEIN 158
Score = 39.7 bits (91), Expect = 7e-08
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 35 YLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENK 92
YL D ++ CF+KAL +DP+N C LG + + +++ F + E+ P+++
Sbjct: 105 YLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQ 162
Score = 24.3 bits (51), Expect = 0.003
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 22 ESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCS 60
E+ ++++G Y DY S F+KA E++P + S
Sbjct: 126 ENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQYS 164