Pairwise Alignments
Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Score = 81.3 bits (199), Expect = 2e-20
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 31/196 (15%)
Query: 232 YNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIEL 291
++ G S+KY+ A+ C++K L + F K +L EYEKA+
Sbjct: 11 HSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKAL--------- 61
Query: 292 DSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESIS 351
F S L ++ +Y+ + Q EK + E+ +S LG YK N+ +S+S
Sbjct: 62 ----QCFNSVLNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLS 117
Query: 352 YFEKSLDLNSNNK------------------YAWNGLGNSYLLLKNYEKALMCYDKAIEI 393
YFEK+ ++N ++ WN G Y +KNY+KAL C++KA+++
Sbjct: 118 YFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKL 177
Query: 394 DPLYNEPKISKSSISK 409
+P + +K+ + K
Sbjct: 178 NPKFESALKNKTMVQK 193
Score = 74.3 bits (181), Expect = 3e-18
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 191 GNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISC 250
G K+ +G LC E+Y A+EC+DK + + A++ KG+ K K+Y A+ C
Sbjct: 6 GIQKWHSHGALLC--NSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQC 63
Query: 251 FEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIEL----DSKNPIFWSGLGLSY 306
F L++N S Y A+ N K+ E +S+N +S LG+
Sbjct: 64 FNSVLNMNPS-----------------YIPAIKNKKQVEEKLKKQESENYNKFSKLGVEN 106
Query: 307 NYLNEYNSSIQSYEKAVELNPEDD------------------ISWSNLGYLQYKNKNYNE 348
+ S+ +EKA E+NP + I W+N G YK KNY +
Sbjct: 107 YKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQK 166
Query: 349 SISYFEKSLDLNSNNKYAWNGLGNSYLLLKN 379
++ FEK++ LN + A L+KN
Sbjct: 167 ALECFEKAVKLNPKFESALKNKTMVQKLIKN 197
Score = 73.2 bits (178), Expect = 6e-18
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 163 WNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVI 222
W+ G + +Y +A+ C+DK L+ + ++ GKG+ K ++Y A++CF+ +
Sbjct: 10 WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
Query: 223 QDECYYDAIYNK---------------------GISCYKSKKYSCAISCFEKALDLNNSN 261
+ Y AI NK G+ YK + ++S FEKA ++ N
Sbjct: 70 MNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEI---N 126
Query: 262 PYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEK 321
PY +++L + E L K+ + PI W+ G+ Y + Y +++ +EK
Sbjct: 127 PY-----SETLRK--NIETTRLKLKEIL------PIRWNNKGVEYYKVKNYQKALECFEK 173
Query: 322 AVELNPEDDISWSNLGYLQYKNKN 345
AV+LNP+ + + N +Q KN
Sbjct: 174 AVKLNPKFESALKNKTMVQKLIKN 197
Score = 53.5 bits (127), Expect = 5e-12
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 38 KDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKS 97
K+YE +++CF+ L ++P +++ K +E + L + E EN
Sbjct: 55 KEYEKALQCFNSVLNMNPSYIPAIK--NKKQVEEK-----------LKKQESENYNKFSK 101
Query: 98 LGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDY- 156
LG + Q ++K+L Y+ K EI+ Y E++ ++T
Sbjct: 102 LGVENYKQGNFEKSLSYFEKAFEINP------------------YSETLRKNIETTRLKL 143
Query: 157 -ETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGK 200
E L + WN+ G YY+ Y KA+ CF+KA+ L+ + +L K
Sbjct: 144 KEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKNK 188
Score = 44.3 bits (103), Expect = 3e-09
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 333 WSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIE 392
W + G L ++ Y E++ ++K L ++ A G G +L LK YEKAL C++ +
Sbjct: 10 WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
Query: 393 IDPLY 397
++P Y
Sbjct: 70 MNPSY 74
Score = 29.3 bits (64), Expect = 1e-04
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 31 GEQCYLEKDYETSVKCFDKALELDP 55
G + Y K+Y+ +++CF+KA++L+P
Sbjct: 155 GVEYYKVKNYQKALECFEKAVKLNP 179