Pairwise Alignments
Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Score = 110 bits (276), Expect = 5e-29
Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 37/366 (10%)
Query: 29 EMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELE 88
E G + Y Y+ S++ F+K L +P N + + G
Sbjct: 17 ETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGN---------------------- 54
Query: 89 PENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEA 148
A LG+ L+Q+ Y+KAL LEI S + L L + ESVE
Sbjct: 55 -----AYHMLGKSKLAQDSYEKALSIRPNDLEIIKSYT-------MLLNSLELFKESVEI 102
Query: 149 FDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKE 208
+ + + LG Y + G++++AI ++ L K L KG +
Sbjct: 103 LKNVSESDDKII---EILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLK 159
Query: 209 QYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYK 268
++ A+E ++K + + N G + Y KKY AI ++ L+ + + K
Sbjct: 160 KFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSK 219
Query: 269 ADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPE 328
D+L +LG+ +A+ Y K +E +N W +GL Y +Y ++I E A E NP
Sbjct: 220 GDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPL 279
Query: 329 DDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYD 388
+ LG K +NYN+ + + EK+LD +S AW G LL+ + +A+ CY
Sbjct: 280 NPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYK 339
Query: 389 KAIEID 394
KAI I+
Sbjct: 340 KAISIN 345
Score = 98.2 bits (243), Expect = 4e-25
Identities = 78/320 (24%), Positives = 149/320 (46%), Gaps = 9/320 (2%)
Query: 47 FDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQE 106
++KAL + P++ LE + Y+M +L++ + L + + ++ LG+ +L
Sbjct: 69 YEKALSIRPND---LEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTG 125
Query: 107 EYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDK--STGDYETLFLTWN 164
++++A+ YN +LE + KG L L +DE++E ++K Y+T W
Sbjct: 126 KFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTE--VWK 183
Query: 165 DLGYCYYQNGEYDKAIGCFDKALTLD-GNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQ 223
++G +Y +Y+KAI +D L G+ +L+ KG K + A++ + K + +
Sbjct: 184 NIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLS-KGDALRKLGKTNEALDLYTKVLEK 242
Query: 224 DECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVL 283
Y+ G+ Y ++ Y AI E A + N NP + +L Y K +
Sbjct: 243 HIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLE 302
Query: 284 NYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKN 343
+KA++ DS+ W G N L + +I Y+KA+ +N D W +L +
Sbjct: 303 FMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTI 362
Query: 344 KNYNESISYFEKSLDLNSNN 363
+ S +E +++L ++N
Sbjct: 363 GKEDYSKEAYENAVNLENHN 382
Score = 75.9 bits (185), Expect = 2e-18
Identities = 67/307 (21%), Positives = 126/307 (41%), Gaps = 35/307 (11%)
Query: 20 ITESSSTYAEMGEQCYLEKD-YETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAE 78
++ES E+ YL+ + ++ ++ LE P L G + + D A
Sbjct: 106 VSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEAL 165
Query: 79 IYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKM 138
+ +++++ P + K++G + ++Y+KA+ +Y+ L KG L+
Sbjct: 166 EIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRK 225
Query: 139 LGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLN 198
LG +E+++ + K + + W +G YY +Y+ AI + A N + LN
Sbjct: 226 LGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELA-----NERNPLN 280
Query: 199 GKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLN 258
+ G + K + Y+ + EKALD +
Sbjct: 281 P-----------------------------SILVKLGRTYVKLRNYNKGLEFMEKALDKD 311
Query: 259 NSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQS 318
+ + YK LN L + +A+ YKKAI ++ + FW L Y + + + S ++
Sbjct: 312 SEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEA 371
Query: 319 YEKAVEL 325
YE AV L
Sbjct: 372 YENAVNL 378
Score = 62.0 bits (149), Expect = 3e-14
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 235 GISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSK 294
G Y S KY +I F K L+ NP +++K ++ + LG+ + A +Y+KA+ +
Sbjct: 19 GTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPN 78
Query: 295 NPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFE 354
+ + N L + S++ + E DD LG K +NE+I +
Sbjct: 79 DLEIIKSYTMLLNSLELFKESVEILKNVSE---SDDKIIEILGDAYLKTGKFNEAILQYN 135
Query: 355 KSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLYNE 399
L+ K G + + LK +++AL Y+K ++I P E
Sbjct: 136 NILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTE 180