Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score =  153 bits (386), Expect = 8e-42
 Identities = 98/323 (30%), Positives = 157/323 (48%), Gaps = 34/323 (10%)

Query: 121 IDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAI 180
           I +   K++  KG+ L   GNY +S+  ++ +  +       W + G    + G Y ++ 
Sbjct: 20  IGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGEST 79

Query: 181 GCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYK 240
            CFDKAL +D     + NG G    K   Y  A+E +DK++  D    +A  NKGI+   
Sbjct: 80  ECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNN 139

Query: 241 SKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWS 300
            ++YS AI CF+K++ +N  N   ++ K ++  +LGEYEK++ +Y KA+ +D K      
Sbjct: 140 MQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALL 199

Query: 301 GLGLSYNYLNEYNSSIQS----------------------------------YEKAVELN 326
           G G SY  L  Y S+I+                                   Y++A+E+N
Sbjct: 200 GKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEALEIN 259

Query: 327 PEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMC 386
           P +     + G    K KNY+ +IS F+ ++ L+  N   W   GNSY+ LK+YE ++ C
Sbjct: 260 PSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISC 319

Query: 387 YDKAIEIDPLYNEPKISKSSISK 409
           Y KA+EI+P     K +   I K
Sbjct: 320 YKKALEIEPKNENAKENIDIIEK 342



 Score =  125 bits (313), Expect = 2e-33
 Identities = 97/367 (26%), Positives = 172/367 (46%), Gaps = 35/367 (9%)

Query: 1   MIKLVVVTIFIFSMLLPLPI-TESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTC 59
           M K+VV    I  +L+   I  + S +Y + G + Y + +Y  S+  ++ AL  +P +  
Sbjct: 1   MQKIVVFLTVILVLLMAGCIGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKS-- 58

Query: 60  SLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLL 119
                            AEI+  +          +L  LG    S E +DKAL     L+
Sbjct: 59  -----------------AEIWVNK--------GNSLLKLGIYGESTECFDKAL-----LI 88

Query: 120 EIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKA 179
           + +NS  + +   G  L   GNY +++E +DKS          W + G        Y +A
Sbjct: 89  DPENS--EAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEA 146

Query: 180 IGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCY 239
           I CFDK+++++         KG    K  +Y  +++ ++KA++ DE    A+  KG S  
Sbjct: 147 IDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYL 206

Query: 240 KSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFW 299
           K + Y  AI CF  A  +N  + Y  +YKAD+      +E A+  Y +A+E++  N    
Sbjct: 207 KLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEALEINPSNSDIL 266

Query: 300 SGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDL 359
              G+  + +  Y+++I +++ A++L+P++   W   G      K+Y  SIS ++K+L++
Sbjct: 267 ISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALEI 326

Query: 360 NSNNKYA 366
              N+ A
Sbjct: 327 EPKNENA 333