Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 581 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 9/253 (3%)

Query: 74  LDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKG 133
           LD A+    R +EL P    A  +LG +      + +A       + I+  +G  W + G
Sbjct: 42  LDGAKACAERAVELAPGLAEAHAALGLVQGRLRRFSEARLSLEHAVRINPRLGMAWLHLG 101

Query: 134 ICLKMLGNY-DESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTL--D 190
             L    +    + EA  ++ G         N L         YD A+  +  A  +  D
Sbjct: 102 EVLSTFPDQLQAAAEALRRAGGLMPRDHRPLNALAGVLMGGKRYDDAVQAYRAAAAMATD 161

Query: 191 GNLKYSLNGKGLCCEKKEQYTMAVECFDKAVI---QDECYYDAIYNKGISCYKSKKYSCA 247
            NL   LN  G+  E+ E+   AV     A +        +D + N  +   ++++   A
Sbjct: 162 PNLADMLNNMGVALERLERRDEAVPMMRAASLIRPDSPAIHDNLGNALLGTAQAEE---A 218

Query: 248 ISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYN 307
            +C  +AL L       +    +SL+R G  ++A   Y++AIE++ + P F + L L+  
Sbjct: 219 ETCHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINPEEPKFHTNLALNLL 278

Query: 308 YLNEYNSSIQSYE 320
                    + YE
Sbjct: 279 LAGRMEEGWREYE 291



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 278 YEKAVLNYKKAIEL--DSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSN 335
           Y+ AV  Y+ A  +  D       + +G++   L   + ++     A  + P+      N
Sbjct: 145 YDDAVQAYRAAAAMATDPNLADMLNNMGVALERLERRDEAVPMMRAASLIRPDSPAIHDN 204

Query: 336 LGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDP 395
           LG          E+ +   ++L L +     W+ LGNS       ++A   Y +AIEI+P
Sbjct: 205 LGNALLGTAQAEEAETCHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINP 264

Query: 396 LYNEPK 401
              EPK
Sbjct: 265 --EEPK 268



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 274 RLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISW 333
           RLG  + A    ++A+EL        + LGL    L  ++ +  S E AV +NP   ++W
Sbjct: 38  RLGGLDGAKACAERAVELAPGLAEAHAALGLVQGRLRRFSEARLSLEHAVRINPRLGMAW 97

Query: 334 SNLG 337
            +LG
Sbjct: 98  LHLG 101



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 23/118 (19%), Positives = 51/118 (43%)

Query: 271 SLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDD 330
           +L RL   ++AV   + A  +   +P     LG +     +   +   + +A+ L  +  
Sbjct: 174 ALERLERRDEAVPMMRAASLIRPDSPAIHDNLGNALLGTAQAEEAETCHRRALALGAKGG 233

Query: 331 ISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYD 388
            +WSNLG   ++    +E+ + + +++++N         L  + LL    E+    Y+
Sbjct: 234 ETWSNLGNSLHRQGRLDEADAAYRRAIEINPEEPKFHTNLALNLLLAGRMEEGWREYE 291



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 320 EKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLG 371
           E+AVEL P    + + LG +Q + + ++E+    E ++ +N     AW  LG
Sbjct: 50  ERAVELAPGLAEAHAALGLVQGRLRRFSEARLSLEHAVRINPRLGMAWLHLG 101



 Score = 24.6 bits (52), Expect = 0.008
 Identities = 17/69 (24%), Positives = 27/69 (39%)

Query: 22  ESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYF 81
           +S + +  +G         E +  C  +AL L      +   LG        LD A+  +
Sbjct: 197 DSPAIHDNLGNALLGTAQAEEAETCHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAY 256

Query: 82  GRLIELEPE 90
            R IE+ PE
Sbjct: 257 RRAIEINPE 265