Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 83.2 bits (204), Expect = 3e-20
 Identities = 73/327 (22%), Positives = 137/327 (41%), Gaps = 8/327 (2%)

Query: 73  NLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYK 132
           N  +AE  +G ++   PE+  AL + G +        ++L + ++   +    G+     
Sbjct: 17  NFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRIGRNF 76

Query: 133 GICLKMLGNYDESVEAF----DKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALT 188
            + L+  G   ES   F    D+     E  F     LG      G +D+AI  F + L 
Sbjct: 77  ALVLQAAGRLPESEREFGRLRDREPDRAEHRF----GLGLVVSAQGRFDEAISHFQEGLA 132

Query: 189 LDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAI 248
           L      +    GL C    +   A++ F KA         A  N G + + + +++ A+
Sbjct: 133 LASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAV 192

Query: 249 SCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNY 308
             + +AL L  ++         +L +LG  E+A   +++A+ELD  NP     LG +   
Sbjct: 193 GAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQD 252

Query: 309 LNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWN 368
           L     + + Y K + + P+   +  N G +  K    +++++ +++ L+L+  N  AW 
Sbjct: 253 LGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWL 312

Query: 369 GLGNSYLLLKNYEKALMCYDKAIEIDP 395
             G +       E AL  +  A+ + P
Sbjct: 313 NRGKALYEAGRVEDALDSFRSALRLMP 339



 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 60/256 (23%), Positives = 111/256 (43%)

Query: 74  LDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKG 133
           L  +E  FGRL + EP+       LG +  +Q  +D+A+ ++ + L + +   +     G
Sbjct: 86  LPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLG 145

Query: 134 ICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNL 193
           +  +  G  DE+++AF K+      L     +LG   +  G +  A+G + +AL L+ N 
Sbjct: 146 LACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNH 205

Query: 194 KYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEK 253
                  G+   K  +   A ECF +A+  D       YN G +     +   A   + K
Sbjct: 206 AEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAK 265

Query: 254 ALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYN 313
            + +   +   +        +LG+ ++AV +Y + +ELD  N   W   G +        
Sbjct: 266 VIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVE 325

Query: 314 SSIQSYEKAVELNPED 329
            ++ S+  A+ L P+D
Sbjct: 326 DALDSFRSALRLMPDD 341



 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 33/122 (27%), Positives = 63/122 (51%)

Query: 28  AEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIEL 87
           A+MG         E + +CF +A+ELDP N      LG+   +   L+ A   + ++I +
Sbjct: 210 ADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAV 269

Query: 88  EPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVE 147
            P++  A  + G I     + D+A+  Y+++LE+D + G  W  +G  L   G  +++++
Sbjct: 270 APDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALD 329

Query: 148 AF 149
           +F
Sbjct: 330 SF 331



 Score = 33.9 bits (76), Expect = 2e-05
 Identities = 22/99 (22%), Positives = 45/99 (45%)

Query: 301 GLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLN 360
           GLGL  +    ++ +I  +++ + L  +D  +  NLG         +E+I  F K+ +L 
Sbjct: 109 GLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELA 168

Query: 361 SNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLYNE 399
                A   LG +      +  A+  + +A+ ++P + E
Sbjct: 169 PALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAE 207



 Score = 26.2 bits (56), Expect = 0.004
 Identities = 18/58 (31%), Positives = 28/58 (48%)

Query: 41  ETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSL 98
           + +V  +D+ LELDP N  +    GK   E   ++ A   F   + L P++  AL  L
Sbjct: 291 DQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDADALCEL 348