Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 548 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 49/258 (18%), Positives = 112/258 (43%), Gaps = 4/258 (1%)

Query: 48  DKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEE 107
           ++ L +D  NT ++  LG  +    +   A     ++++ +P    A+ +LGE  L+   
Sbjct: 31  ERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQAVITLGEAQLALSR 90

Query: 108 YDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLG 167
           +  A   + K+           +  G+ L+ LG  DE+    ++      ++   WN LG
Sbjct: 91  FSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLG 150

Query: 168 YCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECY 227
                 G  D+A+ C ++A+ LD     + N  G+  + +++   A+   ++ +      
Sbjct: 151 DIRRAQGRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDD 210

Query: 228 YDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYK- 286
            +  Y+ G S  ++ + + A + + +A+ L       ++  + SL R G++ +    Y  
Sbjct: 211 PELHYSLGCSLQEATRTADATASYRRAIALRPDYGAAHWNLSHSLLRGGDFSEGWAEYDW 270

Query: 287 --KAIELDSKNP-IFWSG 301
             + ++   ++P   W+G
Sbjct: 271 RWQTVQTADRHPQPLWTG 288



 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 48/227 (21%), Positives = 92/227 (40%)

Query: 171 YQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDA 230
           +  G  + A    ++ L +D     +++  G    ++     A +   K V QD     A
Sbjct: 18  FNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQA 77

Query: 231 IYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIE 290
           +   G +     ++S A + F K       +P  ++    +L  LG  ++A    ++  +
Sbjct: 78  VITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLERCRD 137

Query: 291 LDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESI 350
           +D   P  W+ LG         + ++   E+A++L+P   ++++NLG          E+I
Sbjct: 138 MDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAI 197

Query: 351 SYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLY 397
           S  E+ L L  ++      LG S         A   Y +AI + P Y
Sbjct: 198 SVLERGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIALRPDY 244



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 32/157 (20%), Positives = 70/157 (44%)

Query: 232 YNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIEL 291
           YN G++     +   A +  E+  D++ S P  +    D     G  ++AV   ++AI+L
Sbjct: 113 YNLGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQL 172

Query: 292 DSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESIS 351
           D  + + ++ LG++    +    +I   E+ + L P+D     +LG    +     ++ +
Sbjct: 173 DPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATRTADATA 232

Query: 352 YFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYD 388
            + +++ L  +   A   L +S L   ++ +    YD
Sbjct: 233 SYRRAIALRPDYGAAHWNLSHSLLRGGDFSEGWAEYD 269



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 43/219 (19%), Positives = 82/219 (37%), Gaps = 6/219 (2%)

Query: 30  MGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEP 89
           +G   +   D   +     K ++ DP    ++  LG+  +       A   F ++    P
Sbjct: 47  LGSVAFRRGDPAGAADLLAKVVKQDPGRIQAVITLGEAQLALSRFSDAAANFRKVAAARP 106

Query: 90  ENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAF 149
           ++     +LG         D+A     +  ++D SV   W   G   +  G  DE+V   
Sbjct: 107 DDPVPHYNLGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCL 166

Query: 150 DKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTL---DGNLKYSLNGKGLCCEK 206
           +++        + +N+LG         ++AI   ++ L L   D  L YSL   G   ++
Sbjct: 167 ERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYSL---GCSLQE 223

Query: 207 KEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYS 245
             +   A   + +A+     Y  A +N   S  +   +S
Sbjct: 224 ATRTADATASYRRAIALRPDYGAAHWNLSHSLLRGGDFS 262