Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 221 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 2/195 (1%)

Query: 201 GLCCEKKEQYTMAVECFDKAVIQDECYYDAIY-NKGISCYKSKKYSCAISCFEKALDLNN 259
           GL   KK    M V+ F  A   ++      Y +KGIS  K+ +YS A+   E+  D + 
Sbjct: 23  GLSVAKKLGMNM-VDAFRAAFSVNDDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADA 81

Query: 260 SNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSY 319
            +     +   +  + G  ++     ++++     N    + LGL+Y  + +Y+ ++   
Sbjct: 82  FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLL 141

Query: 320 EKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKN 379
            K  E NP +      LG        ++E+I  F+ +L L  N       +  SY  +  
Sbjct: 142 IKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGR 201

Query: 380 YEKALMCYDKAIEID 394
           +E+AL  + KA E+D
Sbjct: 202 HEEALPHFKKANELD 216



 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 10/166 (6%)

Query: 132 KGICLKMLGNYDESV----EAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKAL 187
           KGI     G Y ++V    + +D    D +        LG  Y + G  D+     +++L
Sbjct: 56  KGISHAKAGRYSQAVMLLEQVYDADAFDVDVAL----HLGIAYVKTGAVDRGTELLERSL 111

Query: 188 T-LDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSC 246
                N+K +    GL   + ++Y +AV    K    +   ++  +  G++     ++  
Sbjct: 112 ADAPDNVKVA-TVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDE 170

Query: 247 AISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELD 292
           AI  F+ AL L  +    +   A S  ++G +E+A+ ++KKA ELD
Sbjct: 171 AIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 216



 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 34/151 (22%), Positives = 65/151 (43%)

Query: 40  YETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLG 99
           Y  +V   ++  + D  +     +LG   ++   +D       R +   P+N      LG
Sbjct: 66  YSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLG 125

Query: 100 EIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETL 159
             ++  ++YD A+    K+ E +       F  G+ L  LG +DE++++F  + G     
Sbjct: 126 LTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 185

Query: 160 FLTWNDLGYCYYQNGEYDKAIGCFDKALTLD 190
                 + + Y Q G +++A+  F KA  LD
Sbjct: 186 GKVHRAIAFSYEQMGRHEEALPHFKKANELD 216



 Score = 34.7 bits (78), Expect = 3e-06
 Identities = 32/161 (19%), Positives = 69/161 (42%)

Query: 200 KGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNN 259
           KG+   K  +Y+ AV   ++    D    D   + GI+  K+          E++L    
Sbjct: 56  KGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAP 115

Query: 260 SNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSY 319
            N         +  ++ +Y+ AV    K  E +  N      LG++ + L  ++ +I S+
Sbjct: 116 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSF 175

Query: 320 EKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLN 360
           + A+ L P +      + +   +   + E++ +F+K+ +L+
Sbjct: 176 KIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 216



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 21/105 (20%), Positives = 44/105 (41%)

Query: 292 DSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESIS 351
           D    +++   G+S+     Y+ ++   E+  + +  D     +LG    K    +    
Sbjct: 46  DDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTE 105

Query: 352 YFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPL 396
             E+SL    +N      LG +Y+ ++ Y+ A+    K  E +P+
Sbjct: 106 LLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI 150