Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 758 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 65/344 (18%), Positives = 124/344 (36%)

Query: 64  LGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDN 123
           LG     +R L  AE  + R + L  +   AL  LG         +++L ++   L +  
Sbjct: 104 LGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQSALALRP 163

Query: 124 SVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCF 183
           +  +        L  LG   E+VE   ++  +         DLG     +G   +A    
Sbjct: 164 NFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHRIEADVAV 223

Query: 184 DKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKK 243
            +AL L  +    L         + +   A+E   +A      Y  A+           +
Sbjct: 224 CRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLMLARQLRAMGR 283

Query: 244 YSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLG 303
              +   + +   +  +     F  A++LN +    +AV  Y+  +  +  +   W+ LG
Sbjct: 284 RDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQALLAREHDHSEVWNNLG 343

Query: 304 LSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNN 363
            +   L E + + + YE A  L+P+D +  SN   L        E+     K + L    
Sbjct: 344 NALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGRVAEAEILCRKVVALQPGI 403

Query: 364 KYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLYNEPKISKSSI 407
               + LG +       E+A   +D A   D   ++ +  ++ +
Sbjct: 404 GIPLSNLGQALYAQGRMEEAREQFDAAGAADSTNDDIRFHRAIV 447



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 30/134 (22%), Positives = 65/134 (48%)

Query: 266 FYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVEL 325
           F KA  L++ G   +AV  Y++ +  +  +      LG++ + + +++ +I    +A+  
Sbjct: 34  FAKAVELHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRA 93

Query: 326 NPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALM 385
           N        NLG   + ++   E+ + + ++L LN++   A  GLGN+       E++L 
Sbjct: 94  NDRVPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLE 153

Query: 386 CYDKAIEIDPLYNE 399
            +  A+ + P + E
Sbjct: 154 FHQSALALRPNFVE 167



 Score = 36.2 bits (82), Expect = 3e-06
 Identities = 24/115 (20%), Positives = 53/115 (46%)

Query: 213 AVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSL 272
           AVE + + ++ +     A +  G++C +  ++  AI    +A+  N+  P  +    ++L
Sbjct: 49  AVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRANDRVPDYHVNLGNAL 108

Query: 273 NRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNP 327
                  +A   Y++A+ L++  P    GLG +         S++ ++ A+ L P
Sbjct: 109 FSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQSALALRP 163



 Score = 35.0 bits (79), Expect = 8e-06
 Identities = 25/134 (18%), Positives = 57/134 (42%)

Query: 22  ESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYF 81
           + S  +  +G       + + + +C++ A  L PD+   +            +  AEI  
Sbjct: 334 DHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGRVAEAEILC 393

Query: 82  GRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGN 141
            +++ L+P     L +LG+   +Q   ++A   ++     D++     F++ I   MLG+
Sbjct: 394 RKVVALQPGIGIPLSNLGQALYAQGRMEEAREQFDAAGAADSTNDDIRFHRAIVRLMLGD 453

Query: 142 YDESVEAFDKSTGD 155
           + E    ++   G+
Sbjct: 454 FAEGWPLYEARWGN 467