Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 44/159 (27%), Positives = 88/159 (55%)

Query: 167 GYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDEC 226
           G   Y+ G++++A+  F++ L    N    L  +G    +  +  +A+E FD  +  D+ 
Sbjct: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66

Query: 227 YYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYK 286
             D I ++ +  +  K+   A+S  ++AL+L+ +NPY Y  +A   +R+G+ E A+ +Y+
Sbjct: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126

Query: 287 KAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVEL 325
           KAIE+D ++ + ++  G+    L     S +S++KA +L
Sbjct: 127 KAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKL 165



 Score = 63.5 bits (153), Expect = 6e-15
 Identities = 40/174 (22%), Positives = 89/174 (51%), Gaps = 2/174 (1%)

Query: 233 NKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELD 292
           N+GIS YK  K+  A+  F + L    + P    ++   L+R+G+ E A+ ++   ++ D
Sbjct: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64

Query: 293 SKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISY 352
             N  F S   +  + L     ++   ++A+ L+P +   +S+  +L+ +  +   +I+ 
Sbjct: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124

Query: 353 FEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLYNEPKISKSS 406
           +EK+++++  +  ++N  G     L   E++   +DKA ++  +  +PK  KS+
Sbjct: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKL--VGYQPKEYKST 176



 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 38/157 (24%), Positives = 75/157 (47%)

Query: 200 KGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNN 259
           +G+   K+ ++  A+E F++ +         + ++G    +  K   A+  F+  L  + 
Sbjct: 6   QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQ 65

Query: 260 SNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSY 319
            N      +A  L+ L   E+A+    +A+ LD  NP  +S      + + +   +I  Y
Sbjct: 66  YNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADY 125

Query: 320 EKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKS 356
           EKA+E++PED +S++N G ++ K      S   F+K+
Sbjct: 126 EKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKA 162



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 13/148 (8%)

Query: 11  IFSMLL------PLPITESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYL 64
           +F+ LL      P+ +       + MG+     +D++  +K      +   D    L  L
Sbjct: 22  VFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAVVLHLL 81

Query: 65  GKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNS 124
            +       LD       R + L+P N     S   +     + + A+  Y K +E+D  
Sbjct: 82  KRNEEALSELD-------RALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPE 134

Query: 125 VGKTWFYKGICLKMLGNYDESVEAFDKS 152
              ++  KGI  + LG  + S ++FDK+
Sbjct: 135 DAVSYNNKGIVEEKLGYKERSKKSFDKA 162



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 7/156 (4%)

Query: 31  GEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPE 90
           G   Y E  +E +++ F++ L   P+    L + G+       L++A   F  L++ +  
Sbjct: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66

Query: 91  NKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGN-------YD 143
           N   +     +    +  ++AL   ++ L +D +    +  +      +G+       Y+
Sbjct: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126

Query: 144 ESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKA 179
           +++E   +    Y    +    LGY       +DKA
Sbjct: 127 KAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKA 162