Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 315 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 53/210 (25%), Positives = 98/210 (46%)

Query: 175 EYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNK 234
           ++D AI  + +AL LD     +   +G+   K   +  A+  F+KA+  D  Y DA Y++
Sbjct: 46  DFDGAIDFYSEALALDQEFVDAYYNRGIAYTKTSDFQRAISDFNKAISIDHQYVDAYYHR 105

Query: 235 GISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSK 294
           GI+ + +     A+S  ++ + L   +   YF +      LG YE A+  + +AIE D  
Sbjct: 106 GIAHFDNGANYNALSDADQLIALAPDDYRGYFLRGLVQETLGNYETALQAFDQAIEHDQT 165

Query: 295 NPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFE 354
               +        Y  +Y S+  +  KA  LNPE+   ++    + ++    + ++ +  
Sbjct: 166 ITDLYVNKATIQYYRKDYKSATTNLNKAESLNPEEPNIFNLRSLIAFERDAIDSALKWVN 225

Query: 355 KSLDLNSNNKYAWNGLGNSYLLLKNYEKAL 384
           K++DLN+   Y +N  G  YL     E+ +
Sbjct: 226 KAIDLNAGQAYFYNNRGLYYLFDGQMERGI 255



 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 56/301 (18%), Positives = 124/301 (41%), Gaps = 7/301 (2%)

Query: 1   MIKLVVVTIFIFSMLLPLPITESSS-TYAEMGEQCYLEKDYETSVKCFDKALELDPDNTC 59
           ++K +  T+ +F +L      E     +   G    +E D++ ++  + +AL LD +   
Sbjct: 7   LLKFLFPTLTVFILLSSCDSNEDKKGRFLLKGNNKMMENDFDGAIDFYSEALALDQEFVD 66

Query: 60  SLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLL 119
           +    G    +  +   A   F + I ++ +   A    G  H        AL   ++L+
Sbjct: 67  AYYNRGIAYTKTSDFQRAISDFNKAISIDHQYVDAYYHRGIAHFDNGANYNALSDADQLI 126

Query: 120 EIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKA 179
            +     + +F +G+  + LGNY+ +++AFD++    +T+   + +     Y   +Y  A
Sbjct: 127 ALAPDDYRGYFLRGLVQETLGNYETALQAFDQAIEHDQTITDLYVNKATIQYYRKDYKSA 186

Query: 180 IGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCY 239
               +KA +L+       N + L   +++    A++  +KA+  +        N+G+   
Sbjct: 187 TTNLNKAESLNPEEPNIFNLRSLIAFERDAIDSALKWVNKAIDLNAGQAYFYNNRGLYYL 246

Query: 240 KSKKYSCAISCFEKALDLNNSNPYC------YFYKADSLNRLGEYEKAVLNYKKAIELDS 293
              +    I     +L  N+ N +       Y+Y + +     +Y + V +   +I+L  
Sbjct: 247 FDGQMERGIEDINFSLKQNSKNLFALRNKGIYYYLSGNKPLAIKYLQEVYSKDSSIKLTK 306

Query: 294 K 294
           K
Sbjct: 307 K 307



 Score = 47.8 bits (112), Expect = 5e-10
 Identities = 34/153 (22%), Positives = 75/153 (49%), Gaps = 2/153 (1%)

Query: 256 DLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSS 315
           D N      +  K ++     +++ A+  Y +A+ LD +    +   G++Y   +++  +
Sbjct: 25  DSNEDKKGRFLLKGNNKMMENDFDGAIDFYSEALALDQEFVDAYYNRGIAYTKTSDFQRA 84

Query: 316 IQSYEKAVELNPEDDISWSNLGYLQYKN-KNYNESISYFEKSLDLNSNNKYAWNGLGNSY 374
           I  + KA+ ++ +   ++ + G   + N  NYN ++S  ++ + L  ++   +   G   
Sbjct: 85  ISDFNKAISIDHQYVDAYYHRGIAHFDNGANYN-ALSDADQLIALAPDDYRGYFLRGLVQ 143

Query: 375 LLLKNYEKALMCYDKAIEIDPLYNEPKISKSSI 407
             L NYE AL  +D+AIE D    +  ++K++I
Sbjct: 144 ETLGNYETALQAFDQAIEHDQTITDLYVNKATI 176