Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 468 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  103 bits (256), Expect = 1e-26
 Identities = 74/325 (22%), Positives = 142/325 (43%)

Query: 36  LEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCAL 95
           L    + +++  +  L +  D       LG +     N + A  ++   ++L+  ++ AL
Sbjct: 113 LNGSVKEAIQILEDFLPMAEDKAEIYYSLGNFYRAENNTEKAIFHYKNAVKLKINHEDAL 172

Query: 96  KSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGD 155
             L  I   +  +D+ L +Y + ++ D    + W+  G+    LG Y+E++ A+D +   
Sbjct: 173 FQLAMITEEEGSFDEILQFYQEFIDQDPYSAEAWYNLGVVYNRLGRYEEAINAYDYALII 232

Query: 156 YETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVE 215
            ++    + ++G       +Y+KA   +   +  +G    +        EK +Q   A  
Sbjct: 233 DDSFASAYFNMGNALMNTQQYEKATEAYLNTINSEGANSENCCYLAAAFEKLDQMDKAFT 292

Query: 216 CFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRL 275
            F K+   D  Y DA +  G+   K  K+  AI  F+KAL L++ N   +   AD+   L
Sbjct: 293 YFKKSAKLDPEYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNANYWVGLADAEYHL 352

Query: 276 GEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSN 335
           G  + +   Y++AI L+      +  L + Y   N +  +I   ++ ++  PED   +  
Sbjct: 353 GNLQASSEAYEEAINLEPGLMETYVNLSIIYFDQNRFEEAIDVLKEGIDELPEDAELYYR 412

Query: 336 LGYLQYKNKNYNESISYFEKSLDLN 360
           L     K   Y E+ SY E +L L+
Sbjct: 413 LVVYLIKTGKYKEAFSYLENALTLD 437



 Score =  102 bits (253), Expect = 3e-26
 Identities = 69/272 (25%), Positives = 131/272 (48%)

Query: 136 LKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKY 195
           L + G+  E+++  +      E     +  LG  Y      +KAI  +  A+ L  N + 
Sbjct: 111 LLLNGSVKEAIQILEDFLPMAEDKAEIYYSLGNFYRAENNTEKAIFHYKNAVKLKINHED 170

Query: 196 SLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKAL 255
           +L    +  E++  +   ++ + + + QD    +A YN G+   +  +Y  AI+ ++ AL
Sbjct: 171 ALFQLAMITEEEGSFDEILQFYQEFIDQDPYSAEAWYNLGVVYNRLGRYEEAINAYDYAL 230

Query: 256 DLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSS 315
            +++S    YF   ++L    +YEKA   Y   I  +  N      L  ++  L++ + +
Sbjct: 231 IIDDSFASAYFNMGNALMNTQQYEKATEAYLNTINSEGANSENCCYLAAAFEKLDQMDKA 290

Query: 316 IQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYL 375
              ++K+ +L+PE D +W  LG    K   + E+I YF+K+L L+S N   W GL ++  
Sbjct: 291 FTYFKKSAKLDPEYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNANYWVGLADAEY 350

Query: 376 LLKNYEKALMCYDKAIEIDPLYNEPKISKSSI 407
            L N + +   Y++AI ++P   E  ++ S I
Sbjct: 351 HLGNLQASSEAYEEAINLEPGLMETYVNLSII 382



 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 67/361 (18%), Positives = 146/361 (40%), Gaps = 35/361 (9%)

Query: 33  QCYLEKD-YETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPEN 91
           QC +  D  E  ++  +    L P+N   +  L    + N ++  A       + +  + 
Sbjct: 75  QCLIFNDELEEGLEVLENINNLSPNNEEIVLALSNGLLLNGSVKEAIQILEDFLPMAEDK 134

Query: 92  KCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDK 151
                SLG  + ++   +KA+++Y   +++  +     F   +  +  G++DE ++ + +
Sbjct: 135 AEIYYSLGNFYRAENNTEKAIFHYKNAVKLKINHEDALFQLAMITEEEGSFDEILQFYQE 194

Query: 152 STGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYT 211
                      W +LG  Y + G Y++AI  +                            
Sbjct: 195 FIDQDPYSAEAWYNLGVVYNRLGRYEEAINAY---------------------------- 226

Query: 212 MAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADS 271
                 D A+I D+ +  A +N G +   +++Y  A   +   ++   +N     Y A +
Sbjct: 227 ------DYALIIDDSFASAYFNMGNALMNTQQYEKATEAYLNTINSEGANSENCCYLAAA 280

Query: 272 LNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDI 331
             +L + +KA   +KK+ +LD +    W GLG+     +++  +I  ++KA++L+  +  
Sbjct: 281 FEKLDQMDKAFTYFKKSAKLDPEYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNAN 340

Query: 332 SWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAI 391
            W  L   +Y   N   S   +E++++L       +  L   Y     +E+A+    + I
Sbjct: 341 YWVGLADAEYHLGNLQASSEAYEEAINLEPGLMETYVNLSIIYFDQNRFEEAIDVLKEGI 400

Query: 392 E 392
           +
Sbjct: 401 D 401



 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 3/177 (1%)

Query: 24  SSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGR 83
           +S Y  MG      + YE + + +   +  +  N+ +  YL     +   +D A  YF +
Sbjct: 237 ASAYFNMGNALMNTQQYEKATEAYLNTINSEGANSENCCYLAAAFEKLDQMDKAFTYFKK 296

Query: 84  LIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYD 143
             +L+PE   A   LG   L ++++ +A++Y+ K L++ +     W         LGN  
Sbjct: 297 SAKLDPEYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNANYWVGLADAEYHLGNLQ 356

Query: 144 ESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKA---LTLDGNLKYSL 197
            S EA++++      L  T+ +L   Y+    +++AI    +    L  D  L Y L
Sbjct: 357 ASSEAYEEAINLEPGLMETYVNLSIIYFDQNRFEEAIDVLKEGIDELPEDAELYYRL 413