Pairwise Alignments

Query, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

Subject, 655 a.a., Probable collagenase (EC 3.4.24.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  147 bits (372), Expect = 7e-40
 Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 31/311 (9%)

Query: 2   VELLAPARDLSGLITAFNNGADSVYCGLKEMSMRATAKNFERNELIEGINFAHDADKRVY 61
           +ELL+PARD    I A N+GAD++Y G      R +A N    ++      AH    RVY
Sbjct: 6   IELLSPARDADIGIEAVNHGADAIYIGGPSFGARTSADN-RVQDIARLTRHAHRFGSRVY 64

Query: 62  LCTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAMVTAKELGL---EVHVSVQNNIT 118
           +  NT++ +D++    ++      A  DA+I+ D+G +    E+ L   ++H S Q +I 
Sbjct: 65  VTMNTILRDDELEGARKLAWQLYDAGADALIIQDMGLL----EIDLPPIQLHASTQTDIR 120

Query: 119 NSKTAEFFSKFA-KRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGRCY 177
             + A F       ++VL+RELTL QI  I++ L   +  +E   FIHGALC A SG+CY
Sbjct: 121 TPEKARFLQDAGLSKLVLARELTLPQIAAIRDALDAERCLIEF--FIHGALCVAYSGQCY 178

Query: 178 LSSYLFNRNANCGDCLQPCRRSWKLVNEHADGTHELISEGKYLLSPKDLCMIEHIPEMID 237
           +S     R+AN GDC Q CR    L  E  D    +++  K++LS KD    +++ E+I+
Sbjct: 179 VSHAHTGRSANRGDCSQACR----LPYEVKDSQGRIVAHDKHVLSMKDNNQSDNLRELIE 234

Query: 238 V-FDCFKIEGRAKNVDYVMRATKTYREAIDSVVDGTYEEKLPI-----------FKKELD 285
                FKIEGR K++ YV   T  YR   D ++    EE+  +           F  + D
Sbjct: 235 AGARSFKIEGRYKDMGYVKNITAHYRVLFDQIL----EERPELGRASSGRCTFGFTPDPD 290

Query: 286 KIYNREYDTGF 296
           + +NRE+   F
Sbjct: 291 QNFNREFTDYF 301