Pairwise Alignments

Query, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

Subject, 653 a.a., putative collagenase (VIMSS) from Escherichia coli BW25113

 Score =  150 bits (380), Expect = 8e-41
 Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 19/274 (6%)

Query: 2   VELLAPARDLSGLITAFNNGADSVYCGLKEMSMRATAKNFERNELIEGINFAHDADKRVY 61
           +ELL+PARD +    A  +GAD+VY G      R  A N    ++ E + FAH    +++
Sbjct: 8   LELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASN-SLKDIAELVPFAHRYGAKIF 66

Query: 62  LCTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAMVTAKELGL---EVHVSVQNNIT 118
           +  NT++++D++     ++       VDA+IV D+G +    EL +   E+H S Q +I 
Sbjct: 67  VTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGIL----ELDIPPIELHASTQCDIR 122

Query: 119 NSKTAEFFSKFA-KRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGRCY 177
             + A+F S     ++VL+REL L+QI+ I +       D  +E FIHGALC A SG+CY
Sbjct: 123 TVEKAKFLSDVGFTQIVLARELNLDQIRAIHQ-----ATDATIEFFIHGALCVAYSGQCY 177

Query: 178 LSSYLFNRNANCGDCLQPCRRSWKLVNEHADGTHELISEGKYLLSPKDLCMIEHIPEMID 237
           +S     R+AN GDC Q CR  + L     D    ++S  K+LLS KD     ++  +ID
Sbjct: 178 ISHAQTGRSANRGDCSQACRLPYTL----KDDQGRVVSYEKHLLSMKDNDQTANLGALID 233

Query: 238 V-FDCFKIEGRAKNVDYVMRATKTYREAIDSVVD 270
                FKIEGR K++ YV   T  YR+ +D++++
Sbjct: 234 AGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIE 267