Pairwise Alignments

Query, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

Subject, 453 a.a., tRNA 5-hydroxyuridine modification protein YegQ from Escherichia coli ECRC62

 Score =  154 bits (390), Expect = 4e-42
 Identities = 126/423 (29%), Positives = 194/423 (45%), Gaps = 59/423 (13%)

Query: 3   ELLAPARDLSGLITAFNNGADSVYCGLKEMSMRATAKNFERNELIEGINFAHDADKRVYL 62
           ELL+PA  L  +  AF  GAD+VY G    S+R     F    L  GIN AH   K+ Y+
Sbjct: 5   ELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKKFYV 64

Query: 63  CTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAMVTAKELGLE--VHVSVQNNITNS 120
             N   +   +      L+       DA+I++D G ++  +E   E  +H+SVQ N  N 
Sbjct: 65  VVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQANAVNW 124

Query: 121 KTAEFFSKFA-KRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGRCYLS 179
            T +F+ +    RV+LSREL+L +I+ I+  +     D+E+E F+HGALC A SGRC LS
Sbjct: 125 ATVKFWQQMGLTRVILSRELSLEEIEEIRNQVP----DMEIEIFVHGALCMAYSGRCLLS 180

Query: 180 SYLFNRNANCGDCLQPCRRSWKLVNEHADGTHELI------------------------- 214
            Y+  R+ N G C   CR  + +     D    ++                         
Sbjct: 181 GYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVF 240

Query: 215 -----------------SEGKYLLSPKDLCMIEHIPEMIDV-FDCFKIEGRAKNVDYVMR 256
                              G Y+++ KDL  I H+  +  +     KIEGR K+  Y  R
Sbjct: 241 MIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCAR 300

Query: 257 ATKTYREAIDSVVDG-TYEEKLPIFKKELDKIYNREYDTGFYFRDLTCNHDLQYEFEGNV 315
             + YR+AID    G  ++  L    + L+ + +R Y  GF  R  T +    YE+  +V
Sbjct: 301 TAQVYRKAIDDAAAGKPFDTSL---LETLEGLAHRGYTEGF-LRRHTHDDYQNYEYGYSV 356

Query: 316 SPYKKIEVGKVVNYFKKVDVAEITLIDDLKVGDSVLIIGPTTGCIEEKIESMQ-VEGENI 374
           S  ++  VG+     +K D+A + + +   VGDS+ ++ P  G I   +E M+  +GE +
Sbjct: 357 SDRQQF-VGEFTGE-RKGDLAAVAVKNKFSVGDSLELMTP-QGNINFTLEHMENAKGEAM 413

Query: 375 TTA 377
             A
Sbjct: 414 PVA 416