Pairwise Alignments

Query, 511 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 585 a.a., carbamoyltransferase from Pseudomonas simiae WCS417

 Score =  190 bits (482), Expect = 1e-52
 Identities = 163/569 (28%), Positives = 269/569 (47%), Gaps = 92/569 (16%)

Query: 2   ILGICDG--HNSSASLINEKKVIYAASEERFTRKKNFR---------------GYPVNSI 44
           ILG+     H+ SA+L  + K+I AA EERF R K+ +               G   + +
Sbjct: 5   ILGLSGALSHDPSAALYIDGKLIAAAEEERFVRDKHAKNRMPYESAKFCLEQAGIKPSDV 64

Query: 45  D------------------YGLNSFVNNENKLSAITVGGQFRKGERLKKLKILQE----N 82
           D                  Y    +   +  L AI +G +  K  R K +  L++     
Sbjct: 65  DVVAIPFAPISLFGEARWHYAKRYWYAPDRALDAILMGNRRYKRYRNKIVWCLEQLGFDP 124

Query: 83  LEIPLYYFNHHLCHAAS-YKLSNFKE-CLILTMDGGGDGLSSTLSIGKGSKIETIAQSDL 140
            +I +    HHL HA+S Y  S F+E   IL +DG G+  ++    G+  KI  I +   
Sbjct: 125 KKIKIEPVEHHLAHASSAYHCSGFQEKTAILGIDGKGEYATTFFGYGENGKIHKIKEFYD 184

Query: 141 IDSVGDFYASITELLGFKPMEDEGKVMS--------------LSSFESSDSKINLDTID- 185
            DS+G  Y +ITE LGF+ ++ E KVM               L+SFE+ +  IN D  + 
Sbjct: 185 PDSLGGLYGAITEFLGFEMLDGEFKVMGMAPYGDASKYDFSRLASFENGELVINTDYANV 244

Query: 186 -----YNEKTKSFKNYLGVIGSESTKTLKRILDYSTPNNSYDIQISKFA------QSKLE 234
                Y EK K F  Y             +++++  P    DI    +       Q+  E
Sbjct: 245 IGLRRYKEKGKGF--YFS----------PKLIEWLGPKREGDIADEPYIHYAASMQALFE 292

Query: 235 EVVLKLLKQFVDE----TGIKNIVFSGGVAQNIKLNKKISEQEFVDNLYVPPFTGDEGLS 290
           ++ L+++  ++ +    TG   + F+GG A N+KLN+KI  ++ V  L+V P +GD G +
Sbjct: 293 KLALQMIDHYLGDILKDTG--KLAFAGGCALNVKLNQKIIARDDVKELFVQPASGDAGTA 350

Query: 291 FGSSILCSKKDF----DLKNTYLGYEIDNYNVEKLVESEKNFKFKYVEEKDIPEIIGSLI 346
            G++   S         +++ YLG    N +V       ++ K  + + +++P+ I  ++
Sbjct: 351 VGAAAYVSHARGVPVEKMEHVYLGPSYSNEDVIAACAKHES-KPNWRKIENMPQRIAKIM 409

Query: 347 LNNKLVCVSRKKMEFGSRALGNRSILGLPTKENTK-KLAKTLK-RNSFMPYAPTILDEYS 404
           ++   V   + +MEFG RALG RSI+G P+      ++   +K R  + P+ P++LD  +
Sbjct: 410 VDGNPVAWFQGRMEFGPRALGGRSIIGCPSATGVADRINHQIKFRERWRPFCPSMLDTVA 469

Query: 405 EIYLKNKLESPYMTMLFDCFESNKKDIEGTVHVDGTTRAQTLKKEFNETYYNIINFVNDK 464
              +K    +P+MT  F+  E  K  +   VH DGT+RAQ LK+E+N  YY+++  +   
Sbjct: 470 PQMIKVDHPAPFMTFTFEVAEEWKTRVPEVVHEDGTSRAQVLKREYNPRYYDMMKELEVL 529

Query: 465 TKIPAVLNTSFNLHGEPIVCSEINAINSF 493
           T     LNTS N  GE ++CS  +A++ F
Sbjct: 530 TGNGVSLNTSLNRRGEAMICSPKDALDMF 558