Pairwise Alignments

Query, 511 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 612 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  193 bits (491), Expect = 1e-53
 Identities = 164/592 (27%), Positives = 263/592 (44%), Gaps = 99/592 (16%)

Query: 9   HNSSASLINEKKVIYAASEERFTRKKNFRGYPVNSIDYGL-NSFVNNENKLSAITVGGQF 67
           H+S+A+L+ + +++  A EERFTRKK+   +P N+I Y L  + +        +     F
Sbjct: 11  HDSAAALVEDGRIVACAQEERFTRKKHDAAFPENAIAYCLAEAGIGLAEVDFVVFYDKPF 70

Query: 68  RKGERLK----------------------KLKILQENLEI--------------PLYYFN 91
            K ERL                       K K+ Q++L                 L +  
Sbjct: 71  LKFERLLETYVAFAPKGFSSFKTAMPVWLKEKLFQKDLLAREFKRFAPGFDWMNKLLFAE 130

Query: 92  HHLCHAAS-YKLSNFKECLILTMDGGGDGLSSTLSIGKGSKIETIAQSDLIDSVGDFYAS 150
           HHL HAAS +  S F++  +LTMDG G+  +++L++G G+++E   +     S+G  Y++
Sbjct: 131 HHLSHAASAFFPSPFEDAAVLTMDGVGEWTTTSLAMGSGNRLEIHKELHFPHSLGLLYSA 190

Query: 151 ITELLGFKPMEDEGKVMSLSSF-ESSDSKINLDTIDYNEKTKSFK--------------- 194
            T   GFK    E K+M L+ + E   + + LD +   ++  SF+               
Sbjct: 191 FTYYTGFKVNSGEYKLMGLAPYGEPKYTSLILDNLIDLKEDGSFRLDQSYFDYCTGLHMT 250

Query: 195 --NYLGVIGSESTKTLKRILDYSTPNNSYDIQISKFAQSKLEEVVLKLLKQFVDETGIKN 252
              +  + G    K  K       P   + + I+   Q   E VV KL      ETG +N
Sbjct: 251 NQRFSALFGQPVRKADK------DPLTQFHMDIAASIQEVTEIVVSKLCHGIKKETGARN 304

Query: 253 IVFSGGVAQNIKLNKKISEQEFVDNLYVPPFTGDEGLSFGSSI------------LCSKK 300
           +  +GGVA N   N K+  +   DN+++ P  GD G + G+++            +   K
Sbjct: 305 LCLAGGVALNCVSNGKVLREGIFDNIWIQPAAGDAGGALGAALAGYHVFKSQPRSVTPGK 364

Query: 301 DFDLKNTYLGYEIDNYNVEKLVESEKNFKFKYVEEKDIPEIIGSLILNNKLVCVSRKKME 360
           D  +K +YLG      ++E  + +    KF  + E ++ E     +   K V   + +ME
Sbjct: 365 DA-MKGSYLGPVFGQADIEARLTAA-GAKFTVMAEAEVTEATAQALAEEKAVGWMQGRME 422

Query: 361 FGSRALGNRSILGLPTKENTKKLA--KTLKRNSFMPYAPTILDEYSEIYLKNKLESPYMT 418
           FG RALG RSILG P     +KL   K   R SF P+AP++L E    +     +SPYM 
Sbjct: 423 FGPRALGGRSILGDPRSPTMQKLLNLKVKYRESFRPFAPSVLREDVADWFDLDGDSPYML 482

Query: 419 MLFDCFESNKKD--------------------IEGTVHVDGTTRAQTLKKEFNETYYNII 458
           ++    E +++                     I    HVD + R QT+  + N  Y+ +I
Sbjct: 483 LVAPVAEKHRRAMTEDENKLFGIDKLNVPRSAIPAVTHVDYSARVQTVHADTNPRYHALI 542

Query: 459 NFVNDKTKIPAVLNTSFNLHGEPIVCSEINAINSFK-KVGDALLLGNYLIEK 509
           +    +T    V+NTSFN+ GEPIVC   +A   F     + L++GN  + K
Sbjct: 543 SAFKARTGCGVVVNTSFNVRGEPIVCGPEDAFRCFMGSEIEVLVVGNCFLRK 594