Pairwise Alignments

Query, 339 a.a., RNA 3'-terminal phosphate cyclase from Methanococcus maripaludis S2

Subject, 338 a.a., RNA 3'-terminal phosphate cyclase from Escherichia coli BL21

 Score =  169 bits (427), Expect = 1e-46
 Identities = 106/323 (32%), Positives = 176/323 (54%), Gaps = 4/323 (1%)

Query: 3   MITIDGSYLEGGGQIVRTAVSLSAITKKPVKIINIRKNRKNPGLSNQHIACVAAVSKICN 62
           MI +DG+  EGGGQI+R+A+SLS IT +P  I  IR  R  PGL  QH+  V A ++IC 
Sbjct: 4   MIALDGAQGEGGGQILRSALSLSMITGQPFTITGIRAGRAKPGLLRQHLTAVKAAAEICR 63

Query: 63  AKVEGLIKGSETLVFYPGKIISKNFEIDIKTAGSISLVIQSILPISLAIDKNVEITIIGG 122
           A VEG   GS+ L+F PG +   ++   I +AGS +LV+Q++LP     D    + + GG
Sbjct: 64  ATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGG 123

Query: 123 TNVEFSPPIDYIKNITLKFLENIGINSEITILKRGFFPKGGGIVKITIKP-SKINPYELI 181
           T+   +PP D+I+ +    L  +GI+ + T+L+ GF+P GGG+V   + P +  N  +L 
Sbjct: 124 TDNPSAPPADFIRRVLEPLLAKMGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLG 183

Query: 182 ENENI-EIKGIVFNQNLDENISKR-IRKSASDELLNRGFCPEIKLEKINGESAGVGIFLY 239
           E  NI +++G V    +  ++++R I   A    L+      +  ++  G +  + +   
Sbjct: 184 ERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESE 243

Query: 240 TNYIGSDRLGKKGLLSEAVGTTASEKLLEELNTKMAIDSHLADQIIPFMPFSDI-TIGVS 298
                   +G+K + +E V     +++   L +  A+  +LADQ++  M  +      V+
Sbjct: 244 NITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVA 303

Query: 299 KITNHTLTNIYVVEKFFDVKFNI 321
             + H LTNI VVE+F  V+F++
Sbjct: 304 HPSCHLLTNIAVVERFLPVRFSL 326