Pairwise Alignments

Query, 180 a.a., winged helix-turn-helix domain-containing protein from Methanococcus maripaludis S2

Subject, 339 a.a., 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial from Xanthobacter sp. DMC5

 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 11 LKALSSRSRISILKALGNKNYTVTELSKSLKLSKSTVHEHLSILVDGELVKKNEDGRKWV 70
          LKA    +R+ ++  LG    TV++L++ L  S+  +  HL +L D  LV ++ +   WV
Sbjct: 19 LKAAGEDTRLRLVAVLGEAELTVSDLTEILGQSQPRISRHLKLLADAGLVDRHREA-SWV 77

Query: 71 YYGLTEKG 78
          +Y    +G
Sbjct: 78 FYRRAAEG 85