Pairwise Alignments

Query, 410 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 438 a.a., COG1361 S-layer family protein from Methanococcus maripaludis S2

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 95/442 (21%), Positives = 181/442 (40%), Gaps = 70/442 (15%)

Query: 9   LLLLVFALISS-SYALSVDDPQYVVDNSEFGETNPNVIHPGDDVNIWIKVVNDNYDKQLK 67
           +L+++F+++ + +Y    D   YV+ N      +P+    GD  ++ + + ND  + +  
Sbjct: 12  MLIMLFSIMGNYAYTFYEDVDDYVILNINKVNQDPDPAIAGDVFDLRVSIENDGGNGE-G 70

Query: 68  DVKVEISPHYPFEIKQVNPETGVAEISHLNEGESDT----AYFKIHVSENAPSDEYRIDV 123
           D  VE+ P YPFE  ++  E  + +I  +N  E       A FK+ VSE+A   +Y I+V
Sbjct: 71  DFIVEVEPSYPFE--EIEGEDLIQDIGIINGYEDGNDAIIAKFKLRVSEDATEGDYPIEV 128

Query: 124 TVTATEYESGDEPNEREKTLTKIYYVPIYGIAKFEINLDDNNPINPSESEELEVYIKNQG 183
            +    Y+ G++ +      TK   V +      E++LD +  +     ++  V    + 
Sbjct: 129 HI----YKKGEDAS---SGYTKEITVTVGNEESAEVSLDADELV---AGDKTNVTFTIEN 178

Query: 184 TGTAKYLTLNLAGTSDLNIVGPTTFYLESLSPQTQKLIKVDA-----YAIPTTED---GI 235
           TG+A    L  +  S+ N + P    L S + +T   I V +     Y +  + D   GI
Sbjct: 179 TGSAPIKNLEFSWESENNAILP----LGSGNLKTISYIGVGSSVDVTYTVLASTDVDPGI 234

Query: 236 YSINANIEWIGEDGAEYTSSIPINLKVKSTIFDNQPFLYLDGVKAISGGQEVTIALANRG 295
           Y +  ++ +  +D    T     +L     +      +   G        E T+ + N G
Sbjct: 235 YELTMDLTY--DDSLNNTKEEVEHLAGILVLGKTDFEVSYSG----EDSGEYTLTVMNVG 288

Query: 296 TSKLKHCVLEI--DGAVELNDNYIRYIGDLEEDDSDSGIYELEVFGDSKTNITATLTYFN 353
            S +   ++ I    A  ++      IG+L+  D     +EL     S + +   +TY +
Sbjct: 289 KSDVNSVIVSIPEQDAWSVSGVSTSIIGNLDGGDYTFSNFELST-TQSDSPLIVEITYTS 347

Query: 354 EYHEEFTLVQEFELDPANSQVKQEGTNYT------------------------------F 383
              +  T+ +E E+ P+ + V    ++ +                               
Sbjct: 348 PEGDRVTIQKEVEM-PSETTVMSMSSDDSSAPQDFASGPGGNRNPLSTIQNSITSAIPYV 406

Query: 384 IGLIVVLAVVAYILYRRWKKRK 405
           IG +V LA +A  +YR  K++K
Sbjct: 407 IGGLVALAAIAVFVYRIIKRKK 428