Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 421 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 43/302 (14%)

Query: 102 GTQVTYHDQEYYSSVFATKSSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTF 161
           GT  +Y +   Y      + ++ + F T+ +  E+  G  + D+  Y       LAH   
Sbjct: 114 GTNESYFEHYQYGRKQNLELASGRAFATDPF--EVVLGAEVADALHYKLGDKLVLAHG-- 169

Query: 162 DREIDIGDKIEINDKKYKVVGILEQIGNPDDDNSIV---------------IPYEAASEV 206
              + +   ++ +DK + VVGIL++ G P D    +               +P +    +
Sbjct: 170 ---VAVVSLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPAQGKGRI 226

Query: 207 FDVDDEYNM---------FMVKIKDGEDVTKVSE-DIEDELEDSRGDENFSVLTAEQLAE 256
              D   NM         FM+ + +     K+S   ++ E+ + RG+   ++L    L E
Sbjct: 227 -SADQARNMDLTPQAITAFMLGLNN-----KISTFALQREINEFRGEPMLAILPGVALQE 280

Query: 257 SISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIF 316
            + S+       L  ++   +L G +G+   +  S+ ERR+++ IL+++GA    I ++ 
Sbjct: 281 -LWSMMGTAEKALFVISLFVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWHIATLL 339

Query: 317 VVEAGFLGLFGGIVGT-ILGILIAKAIEYVAAISGYGLIRAWIS---WELIVGVLVFSFV 372
           + EA  L L G + G  +L + IA +  Y+ A  G  L  +W S   W L+ G+L  + +
Sbjct: 340 IFEAFALALSGVVAGVGLLYVCIAASRGYLQANYGLDLPMSWPSEYEWTLLAGILAAALL 399

Query: 373 VG 374
           +G
Sbjct: 400 MG 401