Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., macrolide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  132 bits (331), Expect = 4e-35
 Identities = 98/403 (24%), Positives = 191/403 (47%), Gaps = 23/403 (5%)

Query: 5   DVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVY 64
           D V  A R +   + ++ LT++GI+IG+ ++V ++++G G +  +  ++   G+++I + 
Sbjct: 267 DAVQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLS 326

Query: 65  PSQQITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTY 124
            +       +     D D+ A+  +  V  ++        V + + +Y + V    ++  
Sbjct: 327 GTSPNPRTPLGIVTLD-DVHALAALPQVQRIMPVNGSEVGVRFSNVDYMAYVGGNDTN-- 383

Query: 125 QIFFTEAYGYELEKGRWMKDSDKYTC----VIGYSLAHDTFDREID-IGDKIEINDKKYK 179
              F E + + + +G +   +D+       VIG+ +    F  E++ IG  I I +  ++
Sbjct: 384 ---FPEIFNWPVVEGNYFTAADERAAATVAVIGHRVREKLFKGEVNPIGQYILIENVPFQ 440

Query: 180 VVGILEQ----IGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIED 235
           V+G+L +     GN D D+ + IPY AAS     +      ++   D   V +    I+ 
Sbjct: 441 VIGVLAEKGAASGNKDSDDRVAIPYTAASVRLFGNYNPEYVVIAAADARKVRETEVAIDQ 500

Query: 236 ELED-SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILE 294
            ++    G  ++ +     + ++ +   + L++ L  +A ISLLVG +G+ N M M++ E
Sbjct: 501 LMQKLHNGKRDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLMTVRE 560

Query: 295 RRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLI 354
           R ++IGI  A GA    IL  F+ EA  L + GG+ G  L +L+   +        + L+
Sbjct: 561 RTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIALALLVGGVLVLAKVAVQFSLL 620

Query: 355 RAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                   + G    + V G++ G+ PAR  A+L+PV  L  E
Sbjct: 621 -------AVFGAFGCALVTGVVFGFMPARKAARLDPVKALTSE 656