Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 669 a.a., Macrolide export ATP-binding/permease protein MacB from Variovorax sp. SCN45

 Score =  134 bits (338), Expect = 6e-36
 Identities = 95/401 (23%), Positives = 186/401 (46%), Gaps = 26/401 (6%)

Query: 10  AGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQI 69
           A R++   + ++ LT++GI+IGI ++VS++++G G + ++  +I   G + + VYP    
Sbjct: 282 AWRSMMAHRMRTALTMLGIIIGITSVVSIVAIGEGAKRFVLSDIKAIGTNTLDVYPGSDF 341

Query: 70  --TSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIF 127
                A  +     DL A+     V  V        ++ Y   +   SV     S +++ 
Sbjct: 342 GDDKAASIRTLTPSDLDALAAQPYVHSVTPSTSRNLRLRYRSVDINGSVNGVSDSFFRV- 400

Query: 128 FTEAYGYELEKGRWMKDSD----KYTCVIGYSLAHDTFDREID-IGDKIEINDKKYKVVG 182
                  ++  G     SD        VI  +     F    D +G  I + +    V+G
Sbjct: 401 ----RDIQMASGAAFTASDVRHQSQVVVIDQNTRRKLFPEGTDPLGKIILVGNLPCTVIG 456

Query: 183 ILEQIGNPDDDN---SIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELED 239
           + ++  N   +N   +I +PY   +        ++   V+I+D +      + +   L  
Sbjct: 457 VSQEKKNMFGENKSLNIWLPYSTGASRLFGQQHFDSITVRIRDDQPTKAAEDSVVKLLTM 516

Query: 240 SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDI 299
             G ++F     + + ++       LT+ L  +A ISL+VG +G+ N M +S+ ER ++I
Sbjct: 517 RHGSKDFFTFNMDSIVKTAERTSQSLTLLLSLIAVISLVVGGIGVMNIMLVSVTERTREI 576

Query: 300 GILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAW-- 357
           GI  A+GA  + +L  F+ EA  + L GG++    G+ ++  I ++ ++     ++ W  
Sbjct: 577 GIRMAVGARQSDVLQQFLTEAVLVCLVGGLI----GVTLSYGISFLFSL----FVKQWQM 628

Query: 358 -ISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
             S   +V   + + ++G+L GY PAR+ A+L+P++ L  E
Sbjct: 629 IFSMGAVVSAFLCASLIGVLFGYLPARNAARLDPIEALARE 669