Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 839 a.a., ABC transporter permease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 52/408 (12%)

Query: 10  AGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEI-SKAGASVIT-----V 63
           A R+  + + +  L I  IV+GI A+V++ S    ++  I ++  S  GA ++      +
Sbjct: 2   AWRDSRRNRGRLALFISSIVLGIAALVAINSFSDNLRTDIDKQAKSLIGADLVIASNKEI 61

Query: 64  YPSQQ--ITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQ------EYYSS 115
            P  Q  + SI +  + +D       +VR V +V++   GGT++            YY +
Sbjct: 62  EPEMQQLLDSIGVGGDRSD-------EVRFVSMVVFEASGGTRLVQVRALERGGFPYYGA 114

Query: 116 VFATKSSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEIND 175
           +    +S  + F         E GR        T ++ Y+            GD I+I +
Sbjct: 115 IETEPASASKSF--------REDGRQALVDQ--TLLLQYNTKP---------GDSIKIGN 155

Query: 176 KKYKVVGILEQIGNPDDDNSIVIP-------YEAASEVFDVDDEYNMF-MVKIKDGEDVT 227
           + +++ G L +I       + + P       Y   + +       + +   K+ +  D  
Sbjct: 156 QTFEIAGALHKIPGQSAMTATIAPAVYIPRRYLDETGLLQRGSRISYYHYYKLPESTDAD 215

Query: 228 KVSEDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNT 287
           K+ + +E  LE++     F   T E   ES    +  L  FL  V  ++LL+G VG+++ 
Sbjct: 216 KLVKKLEPRLEEA----GFGYDTIESRKESTGKAYEDLARFLALVGFVALLLGCVGVASA 271

Query: 288 MHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAA 347
           +H+ I E+   IG+L+ LG        I++ +   +GL G +VG +LG LI   +  +  
Sbjct: 272 VHVYIREKLATIGVLRCLGVSGRQAFLIYLFQVIAMGLIGSVVGAVLGSLIQLYLPQLFQ 331

Query: 348 ISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
                 +   +SW  I   +    ++ +L    P  S   ++P+ TLR
Sbjct: 332 SFLPVEVTVAVSWSAIGQGIAIGVIISVLFALLPLLSVRNVSPLITLR 379



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 76/405 (18%), Positives = 159/405 (39%), Gaps = 48/405 (11%)

Query: 13  NITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQITSI 72
           N+ +   Q+LL  + I +G   I +L  +    Q  +  E++ AG+       +Q    +
Sbjct: 461 NLYRPNNQTLLLTVSIGLGTALIATLFLM----QRILLSEVAFAGSE------NQPNLVL 510

Query: 73  AMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQI---FFT 129
              +N    D+  +   +G+ V+ Y       +   +    ++    K +T +I    FT
Sbjct: 511 FDIQNAQKEDVAQLARQQGLPVLQY--VPVVTMRLEEMNGLTAADVRKDTTLEIPDWAFT 568

Query: 130 EAYGYELEK----------GRWMKDSDKYTCVIGYSLAHDTFDR-EIDIGDKIEINDKKY 178
             Y                G W          I  S+     +R ++++GD +  N +  
Sbjct: 569 REYRVTYRDSLINSETSVAGEWQGQVSDPNAPIPISVEDRYAERLKVELGDTMIFNVQGA 628

Query: 179 KVVGILEQIG----NPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIE 234
            V  ++  +     N    N +V+       V +   ++++ M + +  E      + + 
Sbjct: 629 LVPTVVANLREVEWNRVQSNFLVV---FPKGVLEEAPQFHVLMTRTQSDEQSASFQQTLV 685

Query: 235 DELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILE 294
            +        N S +    + E++  I   ++  +  +A  S+  G + +  +++ S  +
Sbjct: 686 RQFP------NVSAIDLGLILETLDDILGKISFVIRFMALFSISTGLLVLIGSINNSKYQ 739

Query: 295 RRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLI 354
           R ++  +L+ LGA    ILSI   E   LG      GT  G+++A    +  A+  + + 
Sbjct: 740 RVQESVLLRTLGASRKQILSINAFEYLLLGALA--AGT--GVILAVGASWALAVFSFEV- 794

Query: 355 RAWISWELIVGVLVFSFVVGI--LSGYFPARSGAKLNPVDTLRGE 397
            A++  +L   + VF  + G+  L G   +R      P++ LR E
Sbjct: 795 -AFVP-DLTPLLPVFLAITGLTMLIGMLNSRGILNRPPLEVLRRE 837