Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 650 a.a., MacB family efflux pump subunit from Pectobacterium carotovorum WPP14

 Score =  155 bits (393), Expect = 2e-42
 Identities = 110/408 (26%), Positives = 198/408 (48%), Gaps = 30/408 (7%)

Query: 5   DVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVY 64
           D    A   +  ++ ++ LT++GI+IGI ++VS+++LG G Q  +  +I+  G S + ++
Sbjct: 258 DAFKMALLAMNAQRMRTFLTMLGIIIGIASVVSVVALGKGSQEQVLADINSMGTSTLEIF 317

Query: 65  PSQQITSIAMSKNFNDRDLKAVEDVRGVDV-------VLYGWFGGTQVTYHDQEYYSSVF 117
           P          K+F D D  A++ +R  D+        ++        +   +    +V 
Sbjct: 318 PG---------KDFGDMDASAIQTLRASDIQPLTQQPYVHSVTPSISTSVTMRYGNIAVS 368

Query: 118 ATKSSTYQIFFTEAYGYELEKG----RWMKDSDKYTCVIGYSLAHDTFDREID-IGDKIE 172
           A+ S   + FFT   GY L++G    R   D  K   VI  +     F    D IG  I 
Sbjct: 369 ASISGVGEQFFT-VRGYTLQRGMLFPRSSVDELKQDAVIDKNTRDKLFPHGEDPIGQVIL 427

Query: 173 INDKKYKVVGILE--QIGNPDDDN-SIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKV 229
           +     +++G++   Q G   D+N ++ +PY    +            V++KD  D+   
Sbjct: 428 LGSLPVRIIGVVSKNQGGFGSDENLNVWVPYTTVMKRMVGQSYLKSITVRVKDNVDMNVA 487

Query: 230 SEDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMH 289
            + I   L    G ++F ++  + + + I    + LT+ +  +A ISLLVG +G+ N M 
Sbjct: 488 EKSITALLTQRHGTKDFFIMNTDSIRQMIEKTTTTLTLLVSMIALISLLVGGIGVMNIML 547

Query: 290 MSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAIS 349
           +S+ ER ++IG+  A+GA  + I+  F++EA  + LFGGI+G  L + I   + +    S
Sbjct: 548 VSVTERTREIGVRMAVGARTSDIMQQFLIEAVLVCLFGGIIGVALSLAI--GVLFAQFSS 605

Query: 350 GYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            + +I    S   I+   + S ++GI+ G+FPAR  A++ P+  L  E
Sbjct: 606 NFAMI---YSSSSIIAAFLCSSLIGIIFGFFPARRAARMEPIHALERE 650