Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolC from Magnetospirillum magneticum AMB-1

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 29/239 (12%)

Query: 178 YKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDEL 237
           Y+VVG  +      D   I +P EAA   F + ++     V +++ + V +  + I D  
Sbjct: 186 YRVVGTFDVGMFEYDSGFIFMPLEAAQTYFRLPEQVTQIEVFLENPDMVPETRKAIWDLT 245

Query: 238 EDSRG-----DENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSI 292
             +         N +   A Q+  ++  +F +LT+ +        LV A  I +++ M +
Sbjct: 246 GTTATIYDWQQANANFFNAIQVERNV--MFLILTLII--------LVAAFNIISSLIMLV 295

Query: 293 LERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIE----YVAAI 348
            ++ +DI IL+ +GA    IL IF +    +G+ G + GT+LG+  A  IE    ++ +I
Sbjct: 296 KDKGRDIAILRTMGATRGMILRIFFLAGASVGVVGTVAGTVLGVAFATNIENIRQFIQSI 355

Query: 349 SGYGLIRAWISW----------ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            G  L  A I +            +V V++ +  +   +  +PA   AKL+PV+ LR E
Sbjct: 356 IGRELFAAEIYFLTQLPARVETREVVTVVLMALGLSFAATIYPAWRAAKLDPVEALRYE 414