Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  124 bits (312), Expect = 6e-33
 Identities = 98/408 (24%), Positives = 191/408 (46%), Gaps = 28/408 (6%)

Query: 4   KDVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITV 63
           ++ +S A   +   K ++LLT++GI+IGI ++VS++ +G   +  +  +I   G + I +
Sbjct: 255 REALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDI 314

Query: 64  YPSQQITSIAMSKNFNDRDLKAVEDVRGVDVVLYG---WFGGTQVTYHDQ---EYYSSVF 117
           +P          K+F D + +  + ++  D+V      W      +        Y +   
Sbjct: 315 HPG---------KDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDI 365

Query: 118 ATKSSTYQIFFTEAYGYELEKGRW---MKDSDK-YTCVIGYSLAHDTFDREIDI-GDKIE 172
           A  ++     +   YG    +G     ++  D+    V+  +     F  + ++ G+ + 
Sbjct: 366 AVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVL 425

Query: 173 INDKKYKVVGILEQIGNPDDDNSIV---IPYEAASEVFDVDDEYNMFMVKIKDGEDVTKV 229
             +    V+G+ E+  +   +++++   +PY   S+        N   V++KDG D  + 
Sbjct: 426 AGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQA 485

Query: 230 SEDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMH 289
            + +   L    G ++F     + + ++       L +FL  VA ISL+VG +G+ N M 
Sbjct: 486 EQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIML 545

Query: 290 MSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAIS 349
           +S+ ER ++IGI  A+GA  + +L  F++EA  + L GG +G  L + IA  ++    + 
Sbjct: 546 VSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLF--LP 603

Query: 350 GYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           G+ +     S   +    + S   GIL G+ PAR+ A+L+PVD L  E
Sbjct: 604 GWEI---GFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE 648