Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., outer membrane-specific lipoprotein transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 57/232 (24%), Positives = 113/232 (48%), Gaps = 20/232 (8%)

Query: 180 VVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELED 239
           V GIL Q+    D +  +IP   A +  D+    +   +K+ D  +  K+  D   E+ +
Sbjct: 189 VAGIL-QLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA-GEVTN 246

Query: 240 SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDI 299
           S       + T   +   I  I +++ + +V V G++       I +T+ M++ ++  DI
Sbjct: 247 SYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACF----NIVSTLVMAVKDKSGDI 302

Query: 300 GILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIA----KAIEYVAAISGYGLIR 355
            +L+ LGA++  I +IFV      GLFG + G I+G++++      IE++  + G+  + 
Sbjct: 303 AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS 362

Query: 356 AWI----------SWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           + I           W  +  VLV + ++ +L+ ++PAR  + ++P   L G+
Sbjct: 363 SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414