Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Kangiella aquimarina DSM 16071

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 94/435 (21%), Positives = 175/435 (40%), Gaps = 74/435 (17%)

Query: 9   FAGRNITQKKTQ-------SLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVI 61
           F G   T+ K +       SL+++IGI +G++ +++++S+  G +  + + I      V+
Sbjct: 8   FVGLRYTRAKRRNHFISFISLISMIGIALGVMVLITVMSVMNGFERELRDRILGMAPHVL 67

Query: 62  TVYPSQQITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKS 121
                Q +          ++ +K   +V GV   +      T   +  +E +  V     
Sbjct: 68  V----QGLGGPLEDWQSLEKTVKQHPEVVGVSPYIQT---ETMFRFQGRERFGMV----- 115

Query: 122 STYQIFFTEAYG-YELEKGRWMKDS------DKYTCVIGYSLAHDTFDREIDIGDKIEI- 173
              Q    E  G   + K      S       +Y  V+G S+A       I++GDK+ + 
Sbjct: 116 ---QGILPEKIGEVSIVKDNMSMGSFDDIKAGEYNIVLGASVARGL---GINLGDKVSLL 169

Query: 174 --------------NDKKYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVK 219
                           K++ V GI E     D   + +   +AA  +    +      +K
Sbjct: 170 ILSETRISLAGVSMRTKRFTVTGIFETRSEADKSLAFIHMDDAAQLLRQ--EGVTALQLK 227

Query: 220 IKDGEDVTKVSEDIEDELEDSRGDENFSVLTAEQLAESIS---SIFSVLTIFLVGVAGIS 276
             +  +V   +  + + LE      +++    E L  +I     I  +L  F++ VA  +
Sbjct: 228 TNNVMNVYDTNYQVSELLEHQYFVTDWT-RQHETLFNAIDMEKKIMFILLTFIIAVAAFN 286

Query: 277 LLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGI 336
           ++   V       M + E++ DI IL+ LGA   +IL IF+      GL G + G ILG+
Sbjct: 287 IVTSLV-------MLVTEKQADIAILRTLGASPGSILRIFMTSGIINGLIGTLAGVILGV 339

Query: 337 LIA----KAIEYVAAISGYGLIRA------WISWELIVGVLV----FSFVVGILSGYFPA 382
           L+A      + +V    G  +         ++  ELIV  +V     +F + +L+  +P+
Sbjct: 340 LLALNLPDIVSWVETTFGVSVFPQDVYFVNFLPTELIVDDVVKIGLSAFAISVLATLYPS 399

Query: 383 RSGAKLNPVDTLRGE 397
              +K  P + LR E
Sbjct: 400 WKASKTQPAEALRYE 414