Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 646 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Enterobacter asburiae PDN3

 Score =  128 bits (321), Expect = 5e-34
 Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 22/405 (5%)

Query: 4   KDVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITV 63
           ++ ++ A   +   K ++LLT++GI+IGI ++VS++ +G   +  +  +I   G + I V
Sbjct: 253 REALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDV 312

Query: 64  YPSQQI--TSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKS 121
           YP +          +     DL A++    V+          ++   + +  +S      
Sbjct: 313 YPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRVGNVDVAASANGVSG 372

Query: 122 STYQIF---FTEAYGYELEK--GRWMKDSDKYTCVIGYSLAHDTFDREIDI-GDKIEIND 175
             + ++   F+E   +  E+  GR          V+  +     F  + ++ G+ I + +
Sbjct: 373 DYFNVYGMTFSEGATFNAEQLAGR------AQVVVLDANSRRQLFPNKANVVGEVILVGN 426

Query: 176 KKYKVVGILEQIGNPDDDNSIV---IPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSED 232
               V+G+ E+  +    + I+   +PY   S         N   V++K+G D     + 
Sbjct: 427 MPATVIGVAEEKQSMFGSSKILRVWLPYTTISGRIMGQSWLNSITVRVKEGYDSALAEQQ 486

Query: 233 IEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSI 292
           +E  L    G ++F     + L ++       L +FL  VA ISL+VG +G+ N M +S+
Sbjct: 487 LERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSV 546

Query: 293 LERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYG 352
            ER ++IGI  A+GA  + +L  F++EA  + L GG +G  L ++IA A++    + G+ 
Sbjct: 547 TERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLF--LPGWE 604

Query: 353 LIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           +     S   I+   + S   GIL G+ PAR+ A+L+PVD L  E
Sbjct: 605 I---GFSPVAIITAFLCSTFTGILFGWLPARNAARLDPVDALARE 646