Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., macrolide ABC transporter ATP-binding protein/permease MacB from Escherichia coli ECRC62

 Score =  137 bits (346), Expect = 7e-37
 Identities = 106/410 (25%), Positives = 195/410 (47%), Gaps = 34/410 (8%)

Query: 5   DVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVY 64
           + ++ A R +   K ++LLT++GI+IGI ++VS++ +G   +  +  +I   G + I VY
Sbjct: 256 EALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVY 315

Query: 65  PSQQITSIAMSKNFNDRDLKAVEDVRGVDVVLYG---WFGGTQ--VTYHDQEYYSSV-FA 118
           P          K+F D D +  + ++  D++      W       V+ + +  Y++V  A
Sbjct: 316 PG---------KDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVA 366

Query: 119 TKSSTYQIFFTEAYGYELEKGRWMKDSD----KYTCVIGYSLAHDTFDREIDI-GDKIEI 173
             ++     +   YG    +G               V+  +     F  + D+ G+ I +
Sbjct: 367 ASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILV 426

Query: 174 NDKKYKVVGILEQIGNPDDDNSIV---IPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVS 230
            +   +V+G+ E+  +    + ++   +PY   S         N   V++K+G D  +  
Sbjct: 427 GNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAE 486

Query: 231 EDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHM 290
           + +   L    G ++F     + + +++      L +FL  VA ISL+VG +G+ N M +
Sbjct: 487 QQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLV 546

Query: 291 SILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISG 350
           S+ ER ++IGI  A+GA  + +L  F++EA  + L GG +G  L +LIA  ++       
Sbjct: 547 SVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQL------ 600

Query: 351 YGLIRAW-ISWELIVGVLVF--SFVVGILSGYFPARSGAKLNPVDTLRGE 397
              +  W I +  +  +L F  S V GIL G+ PAR+ A+L+PVD L  E
Sbjct: 601 --FLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648