Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 415 a.a., lipoprotein-releasing ABC transporter permease subunit LolE from Dickeya dadantii 3937

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 57/235 (24%), Positives = 113/235 (48%), Gaps = 20/235 (8%)

Query: 177 KYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDE 236
           + +V GIL+  G  D   ++V P   A +  ++ D      +K +D     K+  D  + 
Sbjct: 187 RLQVAGILQLSGQLDHSLALV-PLADAQQYLELGDGITGIAIKAQDVFAAQKLVHDAGEA 245

Query: 237 LEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERR 296
                   ++ V T   +   I  I +++ + +V V G++       I +T+ M++ ++ 
Sbjct: 246 TNVYVYIRSW-VGTYGYMYRDIQMIRTIMYLAMVLVIGVACF----NIVSTLVMAVKDKS 300

Query: 297 KDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILI----AKAIEYVAAISGYG 352
            DI +L+ LGA +  I +IFV      GL G +VGT+ GI++       I  +  ++G+ 
Sbjct: 301 SDIAVLRTLGAGDGLIRAIFVWYGLLAGLLGSVVGTVAGIVVTLQLTPLIRGLERLTGHR 360

Query: 353 LIRA------WISWEL----IVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            +        ++  EL    ++ VLV S V+ +++ ++PAR  ++++P   L G+
Sbjct: 361 FLSGDIYFIDFLPSELHMLDVIIVLVTSLVLSLIASWYPARRASRIDPARVLSGQ 415