Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 389 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  115 bits (288), Expect = 2e-30
 Identities = 98/401 (24%), Positives = 183/401 (45%), Gaps = 35/401 (8%)

Query: 13  NITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQITSI 72
           ++ Q   +++L ++GI +G  A+V+L+++G+             G+ ++       +   
Sbjct: 8   SLRQLGRRAVLALLGITVGCAAVVALLNIGHNAAADAIRAFRDMGSDML-------VAGF 60

Query: 73  AMSKNFNDRDLKAVEDVRGVDVVLYGW-------FGGTQVTYHDQEYYSSVFATKSSTYQ 125
             +   N R + A  D+  +   L G           T    H +++ + V    +   Q
Sbjct: 61  DDTAETNQRRVPATLDIDALTRALPGIRHAAPLILTSTNARLHRRQFNAIVAGAGAELAQ 120

Query: 126 IFFTEAYGYELEKGRWMKDSDKYT--CVIGYSLAHDTFDR--EIDIGDKIEINDKKYKVV 181
           +        ++  GR++   D+ +   V+G   A +  +      +G +I++    ++VV
Sbjct: 121 VL-----ALQVAHGRFLTRYDRQSTYAVLGAKTAVELGEAGTPATLGSRIQLRGYLFEVV 175

Query: 182 GILEQIG-NP----DDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDE 236
           GIL++ G NP      D +I++P E    +     E +  + + +  E + + +  + D 
Sbjct: 176 GILKEQGQNPLLPVPVDEAIILPIEGMHRLLP-SPEISSVVARSRRSETLPQEAAALRDY 234

Query: 237 LEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERR 296
           L         SV  ++QL E ++      T  L G+ GISLL+G VG+ N M M++  RR
Sbjct: 235 LMALAPGREVSVQLSQQLLEGMARQSRTFTWLLAGLGGISLLMGGVGVMNVMVMNVAGRR 294

Query: 297 KDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRA 356
           ++IG+  ALGA    I  +F++EA  L + G + G I+G+L A        +   G I +
Sbjct: 295 REIGVRMALGARPKDIGRLFLLEAAALAIAGALAGAIVGLLTAWLF-----VKMSGWIFS 349

Query: 357 WISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
                L +G+ + S  VG+  G  PA + A+L PV  LR +
Sbjct: 350 LSPLSLPLGI-ISSLAVGVFFGLHPALTAARLEPVKALRDD 389