Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 453 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  117 bits (293), Expect = 7e-31
 Identities = 108/446 (24%), Positives = 196/446 (43%), Gaps = 71/446 (15%)

Query: 14  ITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPS-QQITSI 72
           +   + +SLLT +GI+ G+ A+++++++G G Q  I E+I   G + I + P  +Q+   
Sbjct: 17  VMANRLRSLLTALGIIFGVAAVIAMMAIGNGAQQEILEQIKLVGVNNIIIEPVVEQVEEE 76

Query: 73  AMS---------KNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSST 123
                       KN     L+ + DV  +  V+ G    +     D     S    + S 
Sbjct: 77  VQDGPGGGPGAEKNKFSPGLRML-DVEAIQEVIPGIQRISPEVIMDTHIVKS--GVRRSA 133

Query: 124 YQIFFTEAY----GYELEKGRWMKDSDKYT----CVIGYSLAHDTFDREIDIGDKIEIND 175
             +  T  Y     ++L +G    +++       C+IG  +    F +E  IG +I+  +
Sbjct: 134 KLVGVTPEYFKVTNFKLREGGMFTENNLLNGDPVCIIGRGVQTKFFSKENAIGKRIKCGN 193

Query: 176 KKYKVVGILEQ----------IGNPDDDNSIVIPYEAASEVFDVDD-------------- 211
           +  +V+GILE+          +G  D +  + IP +     +   D              
Sbjct: 194 QWMRVIGILEERIVSDKSLAKLGIRDFNMDVYIPMQTMLVRYKNRDMVTSGSLVSGRQGV 253

Query: 212 -------------------EYNMFMVKIKDGEDVTKVSEDIEDELEDSRGDE-NFSVLTA 251
                              + +  +V++++   +   +E +   LE    +  +F +   
Sbjct: 254 VIINGEVQQNTSNKQTNYHQIDKLVVQVEESSMLNPTAEVLSRLLERKHYNVIDFEITIP 313

Query: 252 EQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENNT 311
           E L +      ++  I L  +AGISLLVG +GI N M  S++ER K+IG+  ALGA+   
Sbjct: 314 ELLLKQQQRTQNIFNIVLGAIAGISLLVGGIGIMNIMLASVMERIKEIGLRLALGAQKTD 373

Query: 312 ILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWISWELIVGVLVFSF 371
           I+  F+ EA  + + GGI+G ILGI++A      + +S +G     I+   I+     + 
Sbjct: 374 IVHQFLFEAMMISVTGGIIGVILGIILA------SLVSQFGDFPTIITIPSILVSFSVAA 427

Query: 372 VVGILSGYFPARSGAKLNPVDTLRGE 397
            VG++ G  PA+  A  +P+ +LR E
Sbjct: 428 TVGLIFGIAPAKRAASQDPITSLRHE 453



 Score = 24.3 bits (51), Expect = 0.008
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 245 NFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGI 301
           NF       +A  + S+ + L I    + G++ ++  + I N     ILE+ K +G+
Sbjct: 9   NFYSALEAVMANRLRSLLTALGI----IFGVAAVIAMMAIGNGAQQEILEQIKLVGV 61