Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 400 a.a., Macrolide export ATP-binding/permease protein MacB from Azospirillum sp. SherDot2

 Score =  124 bits (312), Expect = 4e-33
 Identities = 109/399 (27%), Positives = 182/399 (45%), Gaps = 31/399 (7%)

Query: 12  RNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQITS 71
           RN+   + +SLL ++GI IG  A+V+LIS+G   + +   +    GA ++TV     ++ 
Sbjct: 20  RNLGAMRQRSLLALLGIAIGTAAVVALISIGENAREHSMRQFLAMGADILTVQKDFSLSG 79

Query: 72  IAMSKNFNDRD----LKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIF 127
              +    D D    L  VE+V  + ++      G ++        S+V       + + 
Sbjct: 80  RPAALTRADVDRLRALPGVEEVAPLAML------GVEIRQGRTRLPSAVTGVTPEFFALV 133

Query: 128 FTEAYGYELEKGRWMKDSDKYTCVI--GYSLAHDTFD--REIDIGDKIEINDKKYKVVGI 183
             +A      +GR + + D+   V+  G  LA    +       G  + +    + VVG+
Sbjct: 134 QAKA-----AQGRTLAEGDRTATVVVLGAGLARRLAEDGHPPVPGSLLRMGGYNHTVVGV 188

Query: 184 LE-QIGNP----DDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELE 238
           L     NP    D D++  +P   A  V    D  N+ + K+    D   V + +     
Sbjct: 189 LAGSTPNPVLPLDVDSTAFVPLSGARRVSANSDITNLVVRKMSVAAD-QDVRQSMTGHFS 247

Query: 239 DSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKD 298
                    V +A QL  ++S    V T+ L  + G+SL+VG VG+ N M M ++ERR++
Sbjct: 248 GGAHPRPVMVQSARQLIVAMSDQARVHTLLLAAIGGVSLIVGGVGVMNVMLMGVVERRRE 307

Query: 299 IGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWI 358
           IG+  ALGA    + ++F+ EA  L L GG+ G +LG+  A    + A   G+    +  
Sbjct: 308 IGLRMALGARPIDVCAMFLAEALALSLSGGMAGALLGLAAAAVYAWNA---GWAFAPSVP 364

Query: 359 SWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           S  L +G+   S  VG+  G +PA   ++L PV  LRGE
Sbjct: 365 SLPLGLGM---SSGVGLFFGLYPAMQASRLEPVAALRGE 400