Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., Macrolide export ATP-binding/permease protein MacB from Alteromonas macleodii MIT1002

 Score =  159 bits (403), Expect = 2e-43
 Identities = 110/388 (28%), Positives = 192/388 (49%), Gaps = 22/388 (5%)

Query: 20  QSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPS-QQITSIAMSKNF 78
           ++LLT++GI+IG+ A+V+++++G G +  + E I   G ++I++ P  + + S     + 
Sbjct: 281 RTLLTLLGIIIGVAAVVTMMAIGEGGKQQVLERIETIGTNLISIRPGGRNMRSSGDIASL 340

Query: 79  NDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIFFTEAYGYELEK 138
              D  A++ V GV  V         + Y + ++   +  T    +      A  +E+ +
Sbjct: 341 TLADATALKSVPGVAYVAPERSARATIRYSENDFSGRITGTTPDYFH-----AKDWEMAQ 395

Query: 139 GRWMKDSDKYT----CVIGYSLAHDTF-DREIDIGDKIEINDKKYKVVGILEQ----IGN 189
           G +  D D        VIG ++A   F D+   +G+ I + +  Y+VVG+L       G 
Sbjct: 396 GVFFSDEDVTNYAPVVVIGDTVAETLFEDKYRAVGEYILMQNAFYQVVGVLHSKGASAGG 455

Query: 190 PDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELEDSRGDENFSVL 249
            D D+ ++IP           D  +   +K +  E  T+V +D+   L +  G E+  V 
Sbjct: 456 NDMDDEVLIPVTTGRLKVFGRDYLSSITIKAESTEVATQVKDDVLALLVERHGQEDVMVR 515

Query: 250 TAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAEN 309
           T E L E+++     LT  L  VA ISL VG +G+ N M +++ ER+++IG+  A GA+ 
Sbjct: 516 TTESLVEAVTETQDTLTWLLASVAAISLFVGGIGVMNIMLVNVSERKREIGLRIATGAKP 575

Query: 310 NTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWISWELIVGVLVF 369
             IL  F +EA  + + GGI G +LG  +   +   +    Y L+   +++       V 
Sbjct: 576 RDILRQFNIEAWVVCILGGIFGILLGYFVVLIVASFSVPVAYTLMPPVLAF-------VT 628

Query: 370 SFVVGILSGYFPARSGAKLNPVDTLRGE 397
           S  VG++ GY PA+  +KLNP+D L  E
Sbjct: 629 SLAVGLIFGYAPAQKASKLNPIDALAEE 656