Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score =  135 bits (341), Expect = 3e-36
 Identities = 111/400 (27%), Positives = 185/400 (46%), Gaps = 20/400 (5%)

Query: 5   DVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVY 64
           + +  AG  I   K +SLLT++GI+IGI ++ ++ +LG G Q  I   IS  G + I V 
Sbjct: 256 EALRMAGAAIWAHKMRSLLTMLGIIIGIASVAAISALGAGSQQQILSSISSLGTNTIEVR 315

Query: 65  PSQQITSIAMSK--NFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSS 122
             +    +   K       D +A+ +   VD V         V        +SV    + 
Sbjct: 316 AGKGFGDLEAGKIRTLVPADAEALVNQPYVDSVTPTVTTSVTVKRAAVAVNASVTGVGAD 375

Query: 123 TYQIFFTEAYGYELEKGRWMKDSD----KYTCVIGYSLAHDTF-DREIDIGDKIEINDKK 177
            +++      G EL  G+     D        VI  S A D F DR   +G  I +    
Sbjct: 376 FFRV-----RGLELAHGQLFDAQDVIAYSQNVVIDASAARDLFPDRVNPVGQVILLGTMP 430

Query: 178 YKVVGILEQ---IGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIE 234
            +VVG+ ++    G   D  ++  PY             +   V+I+D  D   V   + 
Sbjct: 431 ARVVGVTKRENSFGPAVDTLTVYAPYTTVMGRMLGRPNVDGITVRIRDDVDPGNVEAAVT 490

Query: 235 DELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILE 294
             +E   G ++F +  +  + E+I +    LT+ +  VA ISL+VG +G+ N M +S+ E
Sbjct: 491 RLIERRHGAKDFFLTNSATIRETIETTTQTLTLLISSVAVISLIVGGIGVMNIMLVSVTE 550

Query: 295 RRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLI 354
           R K+IG+  A+GA  + ILS F++EA  + L GG++G +L + I+     ++        
Sbjct: 551 RTKEIGVRVAVGARRSDILSQFLIEAVMVCLVGGLMGIMLALGISALFNLLSPD-----F 605

Query: 355 RAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTL 394
           +   S   I+     S ++GI+ G+ PAR+ AKL+P++ L
Sbjct: 606 KMIFSPGSIIVAFACSTLIGIVFGFLPARNAAKLDPIEAL 645