Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 435 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 35/244 (14%)

Query: 176 KKYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIED 235
           K YK+ G+ E   +  D + I +P   A   F+ +       + +   +DV  +   +E 
Sbjct: 205 KSYKISGVFEIGMSEYDASMIYMPLSEAQLYFNANGIVQSIELYVSRPDDVDGIRPLVEQ 264

Query: 236 ELEDS--------RGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNT 287
             E          R    FS L  E+     + +F +LT+ +        LV A+ I + 
Sbjct: 265 AAERQIYITDWRQRNQTFFSALQVER-----NVMFMILTLIV--------LVAALNIISG 311

Query: 288 MHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIE---- 343
           + M + ++  DI IL+ +GA +  ++ IF +    +G  G   G  LG+L+   +E    
Sbjct: 312 LIMLVKDKGSDIAILRTMGASSGAVMRIFFMTGAAIGTVGTFAGVALGVLVCLNVESIRQ 371

Query: 344 YVAAISGYGL----------IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDT 393
           + + +SG  L          + A +     + V++ +  +  L+  FPA   +KL+PV  
Sbjct: 372 FFSWVSGTVLFDPQLYFLSQLPAEMDLSETITVVIMALTLSFLATIFPAWRASKLDPVQA 431

Query: 394 LRGE 397
           LR E
Sbjct: 432 LRYE 435