Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 392 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  128 bits (321), Expect = 4e-34
 Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 280 LLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
           L++ ENV KR+     G   AV+ + + I E+E F L+G SG GKTTL +++A    PS 
Sbjct: 33  LIRFENVVKRF-----GDFTAVNNVSLDIYEREFFALLGPSGCGKTTLMRMLAGFEEPSS 87

Query: 340 GNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLE-MPGE 398
           G     LA E  D+  V P      +R + M+FQ Y+L+PH  +  N+   +  + MP  
Sbjct: 88  GR--LTLAGE--DLAGVPPY-----RRPVNMMFQSYALFPHMNVADNIAFGLKQDKMPKA 138

Query: 399 FAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGT 458
               + E  L  V     + E   ++ P +LS G++ RVALA+ L + P ++LLDEP G 
Sbjct: 139 DIDARVEEMLTLV-----KLEKFAKRKPHQLSGGQRQRVALARSLAKRPKVLLLDEPLGA 193

Query: 459 MDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
           +D   R +    +   + +L  T++IV+HD +  + V DR A++  G +++   P EI
Sbjct: 194 LDKKLREETQFELMDLQMDLGMTFLIVTHDQEEAMTVADRIAVMNHGVLVQVDPPAEI 251



 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 36/258 (13%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQI 62
           L+  +NV K +GD   + NVS ++ E +   +LG SG GK+ L+ ML G E  EP+SG++
Sbjct: 33  LIRFENVVKRFGDFTAVNNVSLDIYEREFFALLGPSGCGKTTLMRMLAGFE--EPSSGRL 90

Query: 63  IYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFAL 122
                           +  G+       Y                 ++ + +M Q ++AL
Sbjct: 91  ----------------TLAGEDLAGVPPY-----------------RRPVNMMFQ-SYAL 116

Query: 123 YGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLAR 182
           +    VA+NI   L        D       ++ +VKLE         LSGG++QRV LAR
Sbjct: 117 FPHMNVADNIAFGLKQDKMPKADIDARVEEMLTLVKLEKFAKRKPHQLSGGQRQRVALAR 176

Query: 183 QIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIW 242
            +AK P + L DEP G LD K  +     L +  +   +  +I +H  E    +  +   
Sbjct: 177 SLAKRPKVLLLDEPLGALDKKLREETQFELMDLQMDLGMTFLIVTHDQEEAMTVADRIAV 236

Query: 243 LDKGEMRLVGESKHVVEE 260
           ++ G +  V     + E+
Sbjct: 237 MNHGVLVQVDPPAEIYEQ 254