Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 351 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  129 bits (325), Expect = 1e-34
 Identities = 82/235 (34%), Positives = 133/235 (56%), Gaps = 20/235 (8%)

Query: 283 LENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNY 342
           L+++ KRY ++      AVD + ++I+E E+  L+G SG GKTT  +++   IP ++G  
Sbjct: 6   LQSIVKRYDAMT-----AVDHVSLTISEGELVALLGPSGCGKTTTLRMVGGFIPVTEG-- 58

Query: 343 EFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPGEFAKM 402
             R+     D+T + P      KR +G  FQ Y+L+PH ++  N+  + GLEM       
Sbjct: 59  --RILVGGRDLTHLPP-----NKRNMGFGFQNYALFPHMSVAENV--AFGLEMR---KLP 106

Query: 403 KAE-HTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDP 461
           KAE    V       +  ++ E+ P +LS G++ RVALA+ L+ EP ++LLDEP   +D 
Sbjct: 107 KAEIMAKVKTALDRVKLSHLAERLPKQLSGGQQQRVALARALVIEPDVLLLDEPLSNLDA 166

Query: 462 ITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
             R+++   I+  + +L  T + V+HD D  L+V DR  L+R GKI + G PD++
Sbjct: 167 QLRHEMKTEIRTLQQQLGITTIFVTHDQDEALSVADRVVLMRAGKIEQQGSPDDL 221



 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 36/247 (14%)

Query: 6   VKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYH 65
           ++++ K Y     + +VS  ++EG+++ +LG SG GK+  L M+ G      T G+I+  
Sbjct: 6   LQSIVKRYDAMTAVDHVSLTISEGELVALLGPSGCGKTTTLRMVGGF--IPVTEGRIL-- 61

Query: 66  VAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGE 125
                          VG +         +++ F   N                 +AL+  
Sbjct: 62  ---------------VGGRDLTHLPPNKRNMGFGFQN-----------------YALFPH 89

Query: 126 KTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQIA 185
            +VAEN+   L        +        +  VKL H    + + LSGG++QRV LAR + 
Sbjct: 90  MSVAENVAFGLEMRKLPKAEIMAKVKTALDRVKLSHLAERLPKQLSGGQQQRVALARALV 149

Query: 186 KNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDK 245
             P + L DEP   LD +    +   +     +  I  +  +H  +    +  + + +  
Sbjct: 150 IEPDVLLLDEPLSNLDAQLRHEMKTEIRTLQQQLGITTIFVTHDQDEALSVADRVVLMRA 209

Query: 246 GEMRLVG 252
           G++   G
Sbjct: 210 GKIEQQG 216