Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  168 bits (425), Expect = 5e-46
 Identities = 140/541 (25%), Positives = 256/541 (47%), Gaps = 61/541 (11%)

Query: 3   LLEVKNVSKSY--GDTE--VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           L+E++++S  +  GD    V+ NVSF++  G+ + ++G SG+GKSV  H +  +      
Sbjct: 6   LIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRL------ 59

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQR 118
                              P  + +       Y  + +       I +    +IA++ Q 
Sbjct: 60  ------------------LPYPLARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQE 101

Query: 119 TF-ALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKLEH---RVAHISRDLSGG 173
              +L    ++ + I E L    G +GK AT+  L L+ +V +     R+  +  +LSGG
Sbjct: 102 PMTSLNPLHSIEKQINEVLGLHKGLQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGG 161

Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
           ++QRV++A  +A  P + +ADEPT  LD      +   L E   +  +A+++ SH   ++
Sbjct: 162 QRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLV 221

Query: 234 EELCQKAIWLDKGEM-------RLVGESKHVVEEFMKTVTSMKEFEKVEVKDELLKLEN- 285
             +  +   + KG +        L    +H   + +             +   LL+++N 
Sbjct: 222 RRIAHRVCVMQKGCIVEQADCETLFQSPQHPYTQELLAAEPSGGPASNAIGPPLLEVDNL 281

Query: 286 -----VEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKG 340
                ++K ++      VKAVDGI+ S+ + +  G+VG SG+GK+TL   I  +I  SKG
Sbjct: 282 KVWFPIKKGFLRNTVDYVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIA-SKG 340

Query: 341 NYEFRLAD-EWVDMTKVGPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGLEMPG 397
              F     + +   +V PL     +R + ++FQ+   SL P   +   + E + +   G
Sbjct: 341 GIRFEGQQLDTLSQQQVRPL-----RREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMG 395

Query: 398 EFAKMKAE--HTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEP 455
             A+ +A     L  VG   E       ++P E S G++ R+A+A+ L+ +P LILLDEP
Sbjct: 396 TPAEQEAAIIAALKEVGLDPESRH----RYPHEFSGGQRQRIAIARALVLKPRLILLDEP 451

Query: 456 TGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDE 515
           T  +D   + QV E ++  +++ + TY+ +SHD+  V  +  +  +V+ G++++ G   E
Sbjct: 452 TSALDRTVQRQVVELLRSLQTKYNLTYLFISHDLAVVKALSHQLMVVKHGQVVEQGDAAE 511

Query: 516 I 516
           I
Sbjct: 512 I 512



 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 17/243 (6%)

Query: 277 KDELLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIP 336
           +D L+++ ++   +V+ D    + V+ +   I   E   LVG SG+GK+  +  I  ++P
Sbjct: 3   QDNLIEIRDLSVEFVTGDHHH-RVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLP 61

Query: 337 ------PSKGNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQE--YSLYPHRTILYNLT 388
                 PS G   +   D      K     RG     I M+FQE   SL P  +I   + 
Sbjct: 62  YPLARHPS-GTINYAGQDLLTLKEKTIRHIRGNR---IAMIFQEPMTSLNPLHSIEKQIN 117

Query: 389 ESIGLE--MPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIRE 446
           E +GL   + G+ A  +    L  VG    E    L+  P ELS G++ RV +A  L  E
Sbjct: 118 EVLGLHKGLQGKVATQRTLELLDLVGI--PEPHKRLKALPHELSGGQRQRVMIAMALANE 175

Query: 447 PHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGK 506
           P L++ DEPT  +D   + ++ E +++ ++ L    +++SHD++ V  +  R  +++ G 
Sbjct: 176 PELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGC 235

Query: 507 IIK 509
           I++
Sbjct: 236 IVE 238